Detailed information NTG1112392

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: KJB05_RS03745
• Genome accession: NZ_HG992742
• Coordinates: 797636..801022 (-)
• Length: 1128 a.a.
• NCBI ID: WP_005439415.1
• Uniprot ID: A0A812FE66
• Organism: Vibrio sp. B1ASS3
• Function: chitin sensor (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	796514..797527	797636..801022	flank	109

Gene organization within MGE regions

Location: 796514..801022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJB05_RS03740 (ACOMICROBIO_LOCUS502)	-	796514..797527 (-)	1014	WP_213053086.1	IS110 family transposase	-
KJB05_RS03745 (ACOMICROBIO_LOCUS503)	chiS	797636..801022 (-)	3387	WP_005439415.1	response regulator	Regulator

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127383.21 Da
• Isoelectric Point: 5.4431

>NTDB_id=1112392 KJB05_RS03745 WP_005439415.1 797636..801022(-) (chiS) [Vibrio sp. B1ASS3]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFAAQETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGHDIDEARENAQHRYIKGSGDQIKTSILPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDIDGNVTYSINKDDNYGTNLLTGRYKETALGRTFKRLSEDVSARRKVNEDYTPVVVSDFDIENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIAEINRDSSIETLLVGSDHKPRTINTKQEDIQNSLEIVDKALAGDTEVGTYSNRLGEE
MIAAFAPIETRGLTWALVVQLPEKEAFARVHQLEKLFVIAMLIAIVLVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TTFNTERKDEIGRLAISFERMQRSIREKIQTIKQQNEELESNIKLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLVSGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSGHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISAMVVDDQVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQATQSLAARGHFQIPEANFENNDDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTISDGPETLALIEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLTKPFNKQELAARIQAHLTASKAEMRHIENKLLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQLKRSSADELIAPKFLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSCYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELLREVLVDTMTHA
LEYWESVTGETKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KMQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=1112392 KJB05_RS03745 WP_005439415.1 797636..801022(-) (chiS) [Vibrio sp. B1ASS3]
ATGTTTAAATTCTACAAAAAGCAGAAATTTAAGCGCCTGCAAAGCACGCTAATGACCGCTTTTTTGGTTCTTAGTATTAC
GCCCCTGACGATCACTGCGATTTTCTTCCTGCAATCACACAGTAAAGATCTCCAAGAGCAGAGTACATCGCACCTACTCT
CTGTTCGTGATACTAAGCAACAGCAGATCATTGACTACTTCGCTGCGCAAGAAACGGAAGTGATGGGCTTCGTACGCTCA
GAACTTGCCTATGCCAGTGGCGGACGCTTCTACGGCTTGGTCAACGCATTTAGCCGTTTAGGGCACGATATTGACGAAGC
GAGAGAAAACGCACAGCACCGCTACATCAAAGGCAGTGGCGATCAAATCAAAACGTCGATTTTGCCGGAGTCGTCCAACT
ATGTTGGTAGTGAACGCTACCGCCTACTCCACAAACGCTACCATTGGGCGTACCTAGAACTGCTAAAACGTTCTGATTTC
AATGATATTTTGTTGGTCGACATTGACGGTAATGTCACGTACTCCATCAACAAAGATGACAACTACGGCACAAACCTACT
AACCGGTCGCTATAAAGAGACGGCGTTAGGTCGTACCTTTAAACGTTTATCAGAAGACGTCAGTGCACGCCGAAAAGTCA
ATGAAGATTACACCCCAGTGGTCGTGTCTGACTTTGATATCGAAAACGGAAAGCAAGTTGCTTGGTTAGGTGCGCCTATT
GTTCAACAAGGCTACCTCCACAGTTACGCAATGTTCCGTTTGCCAAATAACGGCATTACCAAGCTTATTGCGGAAATTAA
CCGTGATTCATCCATTGAAACCTTGCTCGTTGGTAGTGACCACAAACCTAGAACGATCAATACCAAACAAGAAGATATCC
AAAACAGCTTAGAAATCGTGGATAAAGCGTTGGCTGGTGACACTGAAGTAGGTACTTATAGTAACCGCTTAGGTGAAGAG
ATGATTGCGGCGTTTGCGCCAATTGAAACTCGTGGCCTAACTTGGGCGCTAGTCGTGCAACTTCCTGAAAAAGAAGCCTT
TGCGCGTGTCCACCAGCTTGAAAAACTGTTTGTGATTGCGATGTTAATTGCGATCGTATTGGTAGTTATCGCCTCACATT
ACTTATCGAACTTCATCACCTCTCCACTCCTCAAGCTGACTTGGGCAGCAGAGAAAGTGTCTGCAGGCGATTTGGATGAA
ACGACCTTTAACACCGAACGAAAAGACGAGATTGGGCGTCTTGCGATCAGCTTTGAGCGTATGCAACGCTCTATTCGTGA
AAAGATTCAAACCATCAAGCAGCAAAATGAAGAGTTAGAAAGCAACATCAAGCTGATCCAAAAGCAAAACGAAGAATTAC
AGCTGGCTGATAAGCTGAAAGATGAGTTCCTTGCGACAACCTCCCATGAACTTCGCACGCCATTACACGGCATGGTTGGT
ATTGCAGAAACCTTGGTATCTGGCGCAAATGGGGCTATTCCGGCTAGCCAGAAATATCAATTGGACATCATCATCAAGAG
TGGTCAACGCCTAGCGAACCTCGTTGATGACTTATTGGATTACCACAAGATGCGCTATGGCAGCATGGATATCCAAAAGT
CAGCAGTGAGTTTAGCAAGTGCCACACGCTTAGTATTAGAGCTTTCCGGTCACCTATTGGGTAACAAGACTATCCGCATC
ATTAACCAAGTGCCTGCGGATTTGAAAGCTGTCTCAGCGGATCCTCAGCGCTTAGAACAAGTGCTGTACAATTTGATCGG
TAATGCCATCAAGTACACCTCTGAAGGTAAGATCGTCATTTCAGCAATGGTTGTTGACGATCAAGTTCGAGTGCAAGTCG
TGGATACAGGTCAAGGCATCCCAGCAGAGCATCTAGAACATATCTTCGAACCTCTGATTCAAGCAGGCCAAGACGCGAGC
CGCTACCGTCAAGGTGCAGGACTGGGTCTATCAATCAGCCGTCAACTTATTGAGTTGATGGGCGGGTCATTGTATGTGAG
CAGTCAACCTATGGTAGGCACCACATTCAGCTTTACCCTGCCGCTGGCAAGTGAAGAAGAGATCCAAGCTACACAGAGCC
TTGCCGCTCGTGGGCACTTCCAAATCCCTGAGGCAAATTTTGAGAACAACGATGACTTGTCTCTGCCAGAGAACCCAGAC
GGTCCATTGCTTTACGTTGCCGATGATGAACCAGTTAACCTGCGCGTTCTAGAAAGCTTCCTAAGGTTGGAAGGCTATCG
CGTTCGTACAATTTCTGATGGTCCAGAAACGCTGGCGTTGATTGAACAAGAAAAGCCAGAACTGCTTTTATTGGACATCA
TGATGCCGGGGATGAGTGGTTATCAAGTGTGTAGCGAGCTTCGTGAAACTTACGATCATGCAGAGCTACCAATCATCATG
CTGACCGCATTAAGCCAAACAGAGGACCGAGTGAGAGGCTTTGAAGCGGGCGCGAATGATTACCTGACAAAACCATTCAA
CAAACAAGAGCTAGCGGCACGTATTCAGGCGCACCTAACGGCAAGTAAAGCGGAAATGCGACACATCGAAAACAAGTTAT
TAGAGTCGGAACTGCGCCAACGTGCAGAAGTCGAAGCGAGCTTGTTGGAGACCCAAGGTCGATTACTAGAGCAGCTAGAG
TCTGCACCAGAAGCCATTATTTGTCTTCGTGAAGACCAACGCATTCGCTTTGCTAATGAAGCGGCCTGTAAGCTGTTTAA
ACGCAGCTTAGAACAGTTGAAGCGCTCTTCAGCAGACGAATTGATCGCGCCTAAGTTCTTGACGGTTAAGCAACCTCACT
ACTGTGGCAAGATTGATATCTACATTGAAGATATTCGCCAAAACATCGAAGCCGACATTCTAAAGCTGCCAGAAGGCTCT
GGTTTGGATGTGATGTACATCTTTAATGTCGGCGGCGGAGCGAACGCTGCTCGTATCCACAATCTAGAGACGGCAGTTGA
AGTGCTTTCATGCTACGCATTCGATGGCGACAAAGACCAACTTCAGAAGCTAAAAGAGCTTGGCGGAGAGTTTACACGCT
TGGCGGATAAAGCTTTGGGTAACAAGAAAGACAAACAAGAGCTTCTTCGTGAGGTTCTTGTCGATACCATGACCCATGCA
TTGGAATACTGGGAATCTGTTACCGGAGAAACCAAGTTTGCGTTTGCTGAGCAAAGTGGCTTGTGGCGTGTTTATCTAGA
CCGCAGTACCTTGCAGACCCGTACCCTAGATAAATACATGCGTATCGAGACATTACCTAAAACACCACGTTGGAGAACGG
TATTAAGCTCGATTGAGTTTATCTTGGAGCACTGTAAAGAACAGAGCCCAGAACGTGCATACATTGAAGCTCAGCGCGAC
AAAATGCAGAGACTTTTAACAAGCTAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

3D structure

• AlphaFold DB: A0A812FE66

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.528	100	0.766