Detailed information NTG1111770

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: HMPREF9425_RS08150
• Genome accession: NZ_GL831112
• Coordinates: 1690626..1691564 (-)
• Length: 312 a.a.
• NCBI ID: WP_003098114.1
• Uniprot ID: A0AAW7QFT6
• Organism: Streptococcus vestibularis ATCC 49124
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1685626..1696564

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HMPREF9425_RS08130 (HMPREF9425_1703)	-	1686233..1686676 (-)	444	WP_003095002.1	zinc-dependent MarR family transcriptional regulator	-
HMPREF9425_RS08135 (HMPREF9425_1704)	-	1686782..1688050 (-)	1269	WP_003098110.1	hypothetical protein	-
HMPREF9425_RS08140 (HMPREF9425_1705)	dusB	1688279..1689256 (-)	978	WP_003098111.1	tRNA dihydrouridine synthase DusB	-
HMPREF9425_RS08145 (HMPREF9425_1706)	hslO	1689249..1690115 (-)	867	WP_002883609.1	Hsp33 family molecular chaperone HslO	-
HMPREF9425_RS10425 (HMPREF9425_1707)	-	1690233..1690397 (-)	165	WP_003098113.1	hypothetical protein	-
HMPREF9425_RS08150 (HMPREF9425_1708)	amiF	1690626..1691564 (-)	939	WP_003098114.1	ABC transporter ATP-binding protein	Regulator
HMPREF9425_RS08155 (HMPREF9425_1709)	oppD	1691566..1692606 (-)	1041	WP_037621603.1	ABC transporter ATP-binding protein	Regulator
HMPREF9425_RS08160 (HMPREF9425_1710)	-	1692620..1693650 (-)	1031	Protein_1665	ABC transporter permease	-
HMPREF9425_RS08165 (HMPREF9425_1711)	-	1693661..1694575 (-)	915	WP_003098119.1	ABC transporter permease	-
HMPREF9425_RS08170 (HMPREF9425_1712)	-	1694706..1696352 (-)	1647	WP_003098122.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 312 a.a.
• Molecular weight: 35194.93 Da
• Isoelectric Point: 6.5087

>NTDB_id=1111770 HMPREF9425_RS08150 WP_003098114.1 1690626..1691564(-) (amiF) [Streptococcus vestibularis ATCC 49124]
MTQERKKLVELKNVSLTFNKGKSNEVKAIDDVSFDIYEGEIFGLVGESGSGKTTIGRSVLKLSDIDSGTITFSGNEISSL
KGKDLHDFRKTAQMIFQDPQASLNGRMKIRDIIAEGIDIHKLAKSKEEREAKVKELIDLVGLNEDHLSRYPHEFSGGQRQ
RIGIARALAVNPHFIVADEPISALDVSIQAQVVNLMQKLQHEQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGPADE
IYHNPIHPYTKSLLSAIPEPDPERERKRQHLIYNSSIENDGENRQMYEIRPGHFVYATEAEAKNYKEEAKAN

Nucleotide

• Length: 939 bp

>NTDB_id=1111770 HMPREF9425_RS08150 WP_003098114.1 1690626..1691564(-) (amiF) [Streptococcus vestibularis ATCC 49124]
ATGACACAAGAACGTAAAAAGTTAGTAGAACTAAAAAATGTGTCTCTAACTTTTAATAAAGGAAAATCAAACGAAGTTAA
GGCTATTGATGACGTTAGCTTTGATATCTATGAGGGCGAAATTTTTGGCCTAGTTGGCGAATCTGGATCAGGTAAAACAA
CCATTGGGCGTTCTGTTTTAAAACTTTCTGATATTGATTCGGGTACTATTACCTTTTCAGGTAATGAGATATCAAGTTTA
AAAGGAAAAGATCTTCATGATTTCCGTAAGACAGCTCAGATGATTTTTCAAGATCCTCAAGCTAGTCTTAATGGACGCAT
GAAAATCCGTGATATTATTGCTGAAGGCATTGATATTCATAAATTGGCTAAATCTAAGGAAGAGCGTGAAGCTAAGGTTA
AAGAACTCATTGATTTGGTAGGGTTAAATGAAGATCACCTATCAAGATATCCTCATGAGTTTTCTGGTGGTCAACGTCAA
AGGATTGGTATTGCGCGTGCTTTAGCGGTTAATCCTCATTTTATTGTAGCAGACGAACCGATTTCTGCTTTGGATGTTTC
TATTCAAGCACAAGTGGTTAATTTGATGCAGAAGTTGCAACATGAACAGGGGTTAACTTATTTGTTTATTGCCCATGATC
TGTCAATGGTTAAATATATATCCGATCGCATTGGTGTGATGCATTGGGGTAAACTCCTTGAAGTAGGACCAGCAGATGAG
ATTTATCATAATCCAATTCATCCTTATACAAAGAGTCTATTGTCTGCAATTCCAGAACCAGATCCAGAAAGAGAGCGTAA
GCGTCAGCATTTGATTTACAATTCCTCTATTGAAAATGATGGGGAAAATAGACAAATGTATGAAATCCGACCAGGGCATT
TTGTTTATGCTACAGAAGCAGAGGCTAAAAATTATAAAGAAGAAGCCAAGGCTAATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	97.756	0.529
amiF	Streptococcus thermophilus LMG 18311	53.77	97.756	0.526
amiF	Streptococcus salivarius strain HSISS4	53.443	97.756	0.522