Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   ACN076_RS03640 Genome accession   NZ_CP184836
Coordinates   741926..742219 (+) Length   97 a.a.
NCBI ID   WP_261037938.1    Uniprot ID   -
Organism   Streptococcus sp. K0074     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 736926..747219
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS03620 (ACN076_03620) - 737139..739004 (+) 1866 WP_001087833.1 AAA family ATPase -
  ACN076_RS03625 (ACN076_03625) - 739041..740642 (+) 1602 WP_420790142.1 type I restriction-modification system subunit M -
  ACN076_RS03630 (ACN076_03630) - 740846..741616 (+) 771 WP_203175997.1 Fic family protein -
  ACN076_RS03635 (ACN076_03635) - 741742..741873 (+) 132 WP_238393794.1 helix-turn-helix domain-containing protein -
  ACN076_RS03640 (ACN076_03640) HI0659 741926..742219 (+) 294 WP_261037938.1 helix-turn-helix domain-containing protein Machinery gene
  ACN076_RS03645 (ACN076_03645) metE 742479..744728 (+) 2250 WP_420790143.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  ACN076_RS03650 (ACN076_03650) metF 744831..745697 (+) 867 WP_261083256.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10680.35 Da        Isoelectric Point: 5.8787

>NTDB_id=1111445 ACN076_RS03640 WP_261037938.1 741926..742219(+) (HI0659) [Streptococcus sp. K0074]
MKNSAIGSNWKDVRSELFTKEEILESDMRVAIMSELIEARHEQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAIVPLEQGKS

Nucleotide


Download         Length: 294 bp        

>NTDB_id=1111445 ACN076_RS03640 WP_261037938.1 741926..742219(+) (HI0659) [Streptococcus sp. K0074]
ATGAAGAATAGTGCTATTGGGAGTAATTGGAAGGATGTCCGATCTGAACTCTTTACCAAGGAGGAAATCCTTGAAAGTGA
TATGCGAGTAGCTATCATGAGTGAGCTGATCGAAGCCAGACATGAGCAAGGAATCAGTCAGAAAAAGCTAGAGGAACTCA
GTGGAGTGAGCCAGCCTGTCATAGCTAGGATGGAAACAGGTAAGACTAGCCCCCAGTTGGATACGGTATTGAAAGTTTTA
GCCAGTTTAGGAAAGACACTAGCAATCGTCCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

60.44

93.814

0.567

Multiple sequence alignment