Detailed information NTG1111352

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ACOI0R_RS18075
• Genome accession: NZ_CP184802
• Coordinates: 2743270..2746662 (+)
• Length: 1130 a.a.
• NCBI ID: WP_420745320.1
• Uniprot ID: -
• Organism: Photobacterium damselae subsp. piscicida strain DQ-SS1
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2738270..2751662

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOI0R_RS18060	hemL	2738983..2740275 (+)	1293	WP_005301305.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ACOI0R_RS18065	-	2740649..2741737 (+)	1089	WP_005301309.1	AI-2E family transporter	-
ACOI0R_RS18070	rsmC	2741937..2742956 (+)	1020	WP_420745319.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ACOI0R_RS18075	chiS	2743270..2746662 (+)	3393	WP_420745320.1	response regulator	Regulator
ACOI0R_RS18080	-	2747363..2749039 (+)	1677	WP_005301313.1	ABC transporter substrate-binding protein	-
ACOI0R_RS18085	-	2749186..2750172 (+)	987	WP_065172285.1	ABC transporter permease	-
ACOI0R_RS18090	-	2750175..2751200 (+)	1026	WP_005301317.1	ABC transporter permease	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 127216.37 Da
• Isoelectric Point: 6.7010

>NTDB_id=1111352 ACOI0R_RS18075 WP_420745320.1 2743270..2746662(+) (chiS) [Photobacterium damselae subsp. piscicida strain DQ-SS1]
MQTKQRFKRLQHTLMLAFLVLSITPLTLSALYFLNSHSKDLAEQSTSHLASLLENKKKQLNQFFAAKESEVQSFARSELA
NASGGRFYGLVGAYHQLGNINNLLNGLTRDQYFKEILTAKGQKSTTNSASYVGHERYRLMYKRYNWAFDEYLKRSDFSDI
LLVDLKGNVVYSAKKPQYFALNLASGKGALKGLQPTFQAISTQAQQLKQDQEVVPVAFADFNLGGNNQSEQAWFAAPIIQ
QGYLHSYVFFQLDINKIATLLADKPQNGQTVQTLLVGQDHHMRLPNSGDLPQQLISPAINQALAGKTGVGSLLNYNNIAV
LSAFTPIKIFNHTWALVVELPEKEAFARIHQLEKIFFAAMLTAIVLVILAALWLSNSITAPLLRLTWASERVSAGDLEQK
IEGTERKDEIGRLATSFARMQCSIREKMSLISKQNQELEKNIHVIKQQNDDLQTADKLKDEFLATTSHELRTPLHGMIGI
AESLLAGANGPMQGAQRRQLEMLINSGQRLTNLVDDLLDYHKMRYGDLDIDKHAVDLASAVRLVLELSGHLLGTKPVRII
NQIPADLPLVQADEQRLEQVLYNLVGNAIKYTSEGKIVLSATVLENQVRIQVVDTGQGIPAEQLEHIFEPLVQANTNHAN
YRQGAGLGLTISRQLLELMGGRLYVSSQPMVGTTFSFTLNIASDEQIRQSHDHGKIHHFQAPLCDATPIEMANLPENLNG
ELLLVVDDEPVNLQILNNFLRLEGYRVLTAESGKQALELVQSHKPALILLDIMMPEMSGYEVCSQLRQQYTPLELPIMML
SALGQVKDRVKGFECGANDYLTKPFNKEELTARIKAHLQAGKTEFEREKNRQLAQEIHQRKQVELSLLETQTRLLGLLES
TTEAILCIQNSGRIRYANDAAAKLFKRTPEQLERHSIDELLLTHLPDELQNNHHYSGSLCFKIGEQQQNLATDILNLPEE
SGLKQMFIFGNSGPSPQQRVQMLEEAIDVLSSYAFDGDKDNLQQLRELGGEFTRLADKLGNDAPNKQDILRELLVDAMRT
TLEVWEQDTKKTKFDLAEESGLWRVYLDRSTLQTRTLDKYLHVETLPKTPRWRTVISTIDYVLDKGSAQNIQHQQLIQMR
DKLQNLLRAS

Nucleotide

• Length: 3393 bp

>NTDB_id=1111352 ACOI0R_RS18075 WP_420745320.1 2743270..2746662(+) (chiS) [Photobacterium damselae subsp. piscicida strain DQ-SS1]
ATGCAAACAAAACAACGATTTAAACGTCTTCAGCATACATTAATGCTGGCTTTTCTTGTTCTTAGTATTACGCCATTAAC
TCTCTCCGCACTGTATTTCCTCAACTCACACTCCAAGGATTTAGCAGAGCAAAGCACATCGCATTTGGCGTCTCTTCTTG
AGAATAAGAAAAAACAACTAAACCAATTTTTTGCGGCTAAAGAGTCTGAGGTGCAAAGTTTTGCTCGTTCAGAGCTTGCT
AATGCCAGTGGTGGCCGCTTCTATGGGTTAGTAGGGGCTTACCATCAATTAGGTAATATCAATAACCTGTTAAATGGCCT
GACGCGAGACCAGTATTTTAAAGAGATTCTCACGGCAAAAGGGCAAAAAAGTACCACCAACAGTGCCAGTTATGTCGGCC
ATGAGCGCTATCGTTTAATGTATAAGCGTTATAACTGGGCATTTGATGAATATCTTAAGCGCTCAGATTTTAGTGATATC
TTATTGGTTGATTTAAAAGGTAATGTGGTCTATTCAGCGAAAAAACCACAGTACTTTGCTTTAAATCTTGCTTCAGGCAA
GGGAGCCTTAAAAGGGTTACAACCAACTTTCCAAGCCATTAGCACTCAAGCTCAACAGCTAAAACAAGACCAAGAAGTCG
TACCCGTTGCTTTTGCCGATTTTAACCTAGGAGGCAATAATCAGTCAGAACAAGCCTGGTTTGCCGCCCCTATCATTCAG
CAAGGGTATTTACACAGCTACGTATTTTTCCAGCTCGATATCAATAAAATTGCAACCTTACTGGCCGATAAACCGCAAAA
TGGTCAAACGGTGCAAACCCTATTGGTAGGCCAAGATCATCACATGCGCTTACCCAATAGTGGAGATTTGCCACAACAAT
TGATCAGCCCAGCCATCAACCAAGCACTTGCAGGTAAAACTGGGGTAGGCAGTTTACTTAACTACAATAATATTGCCGTA
CTCAGTGCCTTTACTCCGATTAAAATCTTTAACCACACCTGGGCATTGGTAGTTGAATTACCCGAAAAAGAAGCATTTGC
TCGTATTCATCAACTCGAAAAAATCTTTTTTGCAGCCATGCTTACTGCCATCGTATTAGTGATTTTAGCCGCTCTTTGGT
TATCAAACTCAATAACGGCTCCCCTATTACGCTTAACTTGGGCATCAGAGCGAGTCTCTGCAGGCGATCTAGAGCAAAAA
ATCGAAGGAACAGAACGTAAAGATGAAATTGGCCGTCTTGCCACTAGCTTTGCTCGAATGCAATGTTCTATTCGGGAAAA
GATGAGTTTGATCAGCAAGCAAAATCAAGAACTTGAAAAAAACATTCACGTAATCAAACAACAAAATGATGATCTGCAAA
CCGCCGACAAACTAAAAGATGAGTTCTTAGCGACGACTTCACATGAGTTGCGCACCCCTCTTCACGGTATGATTGGGATA
GCCGAATCCTTACTTGCTGGAGCAAATGGGCCAATGCAAGGAGCCCAACGCCGTCAATTGGAAATGTTGATCAACAGTGG
GCAGCGTCTAACAAACTTAGTTGATGATTTACTTGATTATCACAAAATGCGTTATGGCGATCTCGATATTGATAAACATG
CAGTCGATCTTGCCAGCGCTGTTCGGTTAGTCCTTGAATTATCTGGCCATTTATTGGGAACCAAACCGGTTCGAATCATT
AACCAAATACCCGCTGATTTACCTTTAGTTCAAGCCGATGAACAACGCCTAGAGCAAGTGCTGTATAACTTGGTTGGTAA
TGCAATCAAATATACCTCTGAAGGTAAGATTGTGCTTTCTGCAACAGTATTGGAAAACCAAGTTCGCATTCAAGTGGTTG
ATACAGGACAAGGAATTCCAGCAGAACAACTTGAACACATCTTTGAACCACTGGTACAAGCCAACACCAATCATGCTAAC
TATCGTCAAGGGGCGGGCCTTGGTTTAACCATTAGCCGTCAATTACTGGAGTTAATGGGTGGTCGCCTGTACGTCAGCAG
TCAGCCAATGGTGGGAACCACTTTTAGTTTCACCCTAAACATCGCCTCCGACGAACAAATTCGCCAAAGCCATGATCACG
GTAAAATTCATCACTTCCAAGCTCCATTGTGTGATGCCACTCCGATTGAAATGGCAAATTTACCTGAAAACTTAAATGGT
GAACTACTACTCGTGGTTGATGATGAACCCGTTAATCTTCAGATACTCAATAACTTCCTAAGACTTGAAGGGTATCGAGT
TCTCACTGCAGAAAGCGGAAAACAGGCCCTTGAGTTAGTACAAAGCCACAAACCTGCACTGATTTTACTCGATATTATGA
TGCCAGAAATGAGTGGTTATGAGGTTTGTAGCCAATTGCGCCAACAATATACCCCATTAGAACTACCGATCATGATGCTA
TCTGCATTGGGGCAAGTTAAAGATCGCGTTAAAGGTTTTGAATGCGGCGCCAATGATTACCTAACAAAACCTTTTAATAA
AGAAGAGCTTACCGCACGTATAAAAGCTCATCTTCAAGCGGGGAAAACTGAATTTGAGCGAGAGAAAAATCGTCAATTAG
CTCAAGAAATTCACCAACGTAAGCAAGTTGAGTTAAGTTTACTTGAGACCCAAACTCGATTACTTGGCCTATTAGAATCC
ACTACCGAAGCCATTTTATGTATTCAAAATAGTGGGCGAATTCGTTATGCCAATGACGCTGCGGCTAAATTATTTAAACG
CACCCCAGAGCAATTGGAGCGCCACTCTATCGATGAACTACTGCTAACCCATCTACCTGATGAGTTACAAAATAATCATC
ATTACAGTGGTTCACTGTGTTTCAAAATTGGCGAACAACAACAAAACCTTGCTACCGATATCCTCAATTTGCCAGAAGAG
TCTGGACTTAAGCAGATGTTTATCTTCGGCAATAGCGGGCCATCGCCACAGCAACGAGTACAAATGCTTGAAGAAGCTAT
TGATGTTTTATCGAGCTATGCTTTTGATGGTGACAAAGACAACTTACAACAATTGCGTGAGCTAGGTGGAGAATTCACCA
GACTGGCAGACAAATTGGGTAATGATGCCCCTAATAAACAAGATATTTTGCGCGAATTGCTGGTTGATGCCATGCGTACA
ACGCTTGAGGTTTGGGAGCAAGATACGAAAAAAACCAAGTTTGATTTAGCCGAAGAGAGTGGATTATGGCGTGTTTATCT
CGATCGCAGTACGCTACAAACTCGCACCTTAGATAAATATCTCCATGTTGAGACTCTTCCTAAAACGCCGCGTTGGCGCA
CGGTTATTAGCACCATAGACTATGTTCTTGATAAAGGCAGTGCTCAAAATATCCAACATCAACAGCTGATCCAGATGCGA
GATAAATTGCAGAACTTATTACGAGCAAGTTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (724-835)

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• HAMP domain (HAMP) (373-421)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-680)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	58.85	100	0.589