Detailed information NTG1111207

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: ACOGJJ_RS26135
• Genome accession: NZ_CP184769
• Coordinates: 5111520..5112647 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470745.1
• Uniprot ID: A0A9W5QA17
• Organism: Bacillus cereus strain JG8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5106520..5117647

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOGJJ_RS26105 (ACOGJJ_26105)	spoIIIJ	5106551..5107327 (-)	777	WP_000727734.1	YidC family membrane integrase SpoIIIJ	-
ACOGJJ_RS26110 (ACOGJJ_26110)	rnpA	5107380..5107727 (-)	348	WP_000726619.1	ribonuclease P protein component	-
ACOGJJ_RS26115 (ACOGJJ_26115)	rpmH	5107804..5107938 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
ACOGJJ_RS26120 (ACOGJJ_26120)	dnaA	5108503..5109843 (+)	1341	WP_000428017.1	chromosomal replication initiator protein DnaA	-
ACOGJJ_RS26125 (ACOGJJ_26125)	dnaN	5110022..5111167 (+)	1146	WP_001212884.1	DNA polymerase III subunit beta	-
ACOGJJ_RS26130 (ACOGJJ_26130)	yaaA	5111295..5111507 (+)	213	WP_000821364.1	S4 domain-containing protein YaaA	-
ACOGJJ_RS26135 (ACOGJJ_26135)	recF	5111520..5112647 (+)	1128	WP_000470745.1	DNA replication/repair protein RecF	Machinery gene
ACOGJJ_RS26140 (ACOGJJ_26140)	gyrB	5112685..5114607 (+)	1923	WP_000435982.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
ACOGJJ_RS26145 (ACOGJJ_26145)	gyrA	5114696..5117167 (+)	2472	WP_001282864.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43362.67 Da
• Isoelectric Point: 6.6001

>NTDB_id=1111207 ACOGJJ_RS26135 WP_000470745.1 5111520..5112647(+) (recF) [Bacillus cereus strain JG8]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRE

Nucleotide

• Length: 1128 bp

>NTDB_id=1111207 ACOGJJ_RS26135 WP_000470745.1 5111520..5112647(+) (recF) [Bacillus cereus strain JG8]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCGCAAGGGAAAACAAATTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAACTTATCCGCTGGGATGAAGATTTTGGTCAAATAAAAGGGAAATTACAAAAAAGAAACAGTTCT
TTGTCTTTGGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAGCAAAAGTTAAGTCAATA
TATTGGCGTGATGAACGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTGTATATTTGTATGAATTAAGTCAATATCAAAAGGTGCTCACGCAACGA
AATCACTTGTTGAAAAAAATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTAATTGA
GCATGGTGCGAAAATACTGCAAAAACGTTTTGAATTTTTGCATTTGCTACAGGAATGGGCAGCTCCAATTCATCGAGGTA
TAAGCCGTGGATTAGAAGAGTTAGAAATTGTCTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGACGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTAT
CCCTAAAATTAGCTGAAATTGAATTGATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGTTGGATGATGTTTTATCA
GAATTAGATGATTATCGTCAATCACATCTTTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACTGTAGATTGTGAAATAGATA
GGGAATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.576	98.133	0.653