Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACKTT5_RS08015 Genome accession   NZ_AP038761
Coordinates   1669666..1670292 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei subsp. xiangfangensis strain B12-S377     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1664666..1675292
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKTT5_RS07995 - 1665065..1666825 (-) 1761 WP_032657964.1 Lon protease family protein -
  ACKTT5_RS08000 matP 1667012..1667464 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  ACKTT5_RS08005 ompA 1667530..1668582 (-) 1053 WP_017694761.1 porin OmpA -
  ACKTT5_RS08010 sulA 1668939..1669448 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  ACKTT5_RS08015 sxy/tfoX 1669666..1670292 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  ACKTT5_RS08020 yccS 1670249..1672411 (-) 2163 WP_045894111.1 YccS family putative transporter -
  ACKTT5_RS08025 - 1672430..1672876 (-) 447 WP_003858149.1 YccF domain-containing protein -
  ACKTT5_RS08030 helD 1672999..1675053 (+) 2055 WP_032608969.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=111117 ACKTT5_RS08015 WP_023315767.1 1669666..1670292(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain B12-S377]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=111117 ACKTT5_RS08015 WP_023315767.1 1669666..1670292(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain B12-S377]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment