Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ACNR93_RS09000 Genome accession   NZ_CP184736
Coordinates   1835456..1836184 (+) Length   242 a.a.
NCBI ID   WP_420544088.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1830456..1841184
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS08975 (ACNR93_08975) rpmF 1830876..1831052 (+) 177 WP_003066947.1 50S ribosomal protein L32 -
  ACNR93_RS08980 (ACNR93_08980) rpmG 1831069..1831218 (+) 150 WP_002262412.1 50S ribosomal protein L33 -
  ACNR93_RS08985 (ACNR93_08985) - 1831390..1831647 (+) 258 WP_420543626.1 hypothetical protein -
  ACNR93_RS08990 (ACNR93_08990) treC 1831621..1833273 (-) 1653 WP_420543627.1 alpha,alpha-phosphotrehalase -
  ACNR93_RS08995 (ACNR93_08995) treP 1833285..1835261 (-) 1977 WP_420543628.1 PTS system trehalose-specific EIIBC component -
  ACNR93_RS09000 (ACNR93_09000) treR 1835456..1836184 (+) 729 WP_420544088.1 trehalose operon repressor Regulator
  ACNR93_RS09005 (ACNR93_09005) - 1836274..1836609 (+) 336 WP_420543629.1 hypothetical protein -
  ACNR93_RS09010 (ACNR93_09010) - 1836764..1837090 (+) 327 WP_021143348.1 PadR family transcriptional regulator -
  ACNR93_RS09015 (ACNR93_09015) - 1837077..1837661 (+) 585 WP_039697761.1 DUF1700 domain-containing protein -
  ACNR93_RS09020 (ACNR93_09020) - 1837658..1838569 (+) 912 WP_420543630.1 DUF4097 family beta strand repeat-containing protein -
  ACNR93_RS09025 (ACNR93_09025) - 1838607..1838960 (-) 354 WP_004233620.1 DUF1304 domain-containing protein -

Sequence

Protein


Download         Length: 242 a.a.        Molecular weight: 27909.10 Da        Isoelectric Point: 9.6004

>NTDB_id=1110982 ACNR93_RS09000 WP_420544088.1 1835456..1836184(+) (treR) [Streptococcus equinus strain NM-2-29]
MKKYERIYQILEKAITSGVYSAGDYLPTENELCTQYHVSRDTVRKALSLLAEARLIKKIHGSGSQVIKRETIDFPVSKLT
SYKELVDNFGINSKTNVISIDKLIVDEKLTALTGFSKNSLVWRVIRQRVVDGTASVIDIDYLDKKIVPNMTREIAEKSIY
DYLENQLHLSITYAQKEITIDQLNDRDKLLLDIGAEHHVVSIKSKVYLANNQQFQFTESRHKLEKFRFVDFATRKNLLPT
KH

Nucleotide


Download         Length: 729 bp        

>NTDB_id=1110982 ACNR93_RS09000 WP_420544088.1 1835456..1836184(+) (treR) [Streptococcus equinus strain NM-2-29]
ATGAAGAAATACGAGCGCATTTACCAAATTCTAGAAAAAGCCATCACATCAGGAGTCTATTCAGCTGGTGATTATCTTCC
TACCGAAAATGAACTCTGTACACAATATCATGTCAGTCGCGACACCGTCCGTAAAGCATTGAGCTTGCTTGCCGAAGCAA
GACTAATCAAGAAAATTCACGGCTCTGGTTCACAAGTTATCAAACGCGAAACGATTGACTTTCCTGTTTCAAAATTAACG
AGCTATAAAGAACTTGTCGACAATTTCGGTATTAATTCTAAAACCAACGTCATTTCCATTGATAAGCTGATTGTCGATGA
GAAACTTACTGCGCTGACAGGATTCTCAAAAAACAGCTTAGTATGGCGCGTGATTCGCCAACGTGTGGTTGATGGCACAG
CTTCTGTCATTGATATTGATTATTTAGATAAAAAAATCGTGCCAAATATGACCCGAGAAATTGCAGAGAAATCTATTTAT
GATTATCTTGAAAATCAACTCCATCTGAGCATCACTTATGCTCAAAAAGAAATTACCATCGACCAGCTTAACGACCGTGA
CAAACTACTTCTTGATATTGGCGCTGAACATCACGTCGTTTCAATCAAATCAAAAGTCTACCTTGCCAATAACCAACAGT
TTCAGTTCACCGAAAGTAGACACAAACTTGAAAAATTCCGCTTTGTGGATTTTGCAACACGAAAAAACTTGCTACCGACC
AAACATTAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(90-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

96.694

0.665

Multiple sequence alignment