Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACNR93_RS02620 Genome accession   NZ_CP184736
Coordinates   496895..497980 (+) Length   361 a.a.
NCBI ID   WP_039698469.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 491895..502980
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS02595 (ACNR93_02595) asnA 492902..493894 (+) 993 WP_021141821.1 aspartate--ammonia ligase -
  ACNR93_RS02600 (ACNR93_02600) - 494004..494723 (-) 720 WP_420543829.1 hypothetical protein -
  ACNR93_RS02605 (ACNR93_02605) - 494872..495717 (-) 846 WP_420544062.1 hypothetical protein -
  ACNR93_RS02610 (ACNR93_02610) rsmD 495849..496388 (+) 540 WP_420543830.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACNR93_RS02615 (ACNR93_02615) coaD 496420..496917 (+) 498 WP_420543831.1 pantetheine-phosphate adenylyltransferase -
  ACNR93_RS02620 (ACNR93_02620) sepM 496895..497980 (+) 1086 WP_039698469.1 SepM family pheromone-processing serine protease Regulator
  ACNR93_RS02625 (ACNR93_02625) - 498093..498338 (+) 246 WP_039691103.1 DUF3923 family protein -
  ACNR93_RS02630 (ACNR93_02630) - 498424..499755 (+) 1332 WP_420543832.1 bifunctional metallophosphatase/5'-nucleotidase -
  ACNR93_RS02635 (ACNR93_02635) - 499785..500345 (+) 561 WP_420543833.1 YutD family protein -
  ACNR93_RS02640 (ACNR93_02640) rlmN 500366..501466 (+) 1101 WP_021141827.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ACNR93_RS02645 (ACNR93_02645) - 501477..501986 (+) 510 WP_420543834.1 VanZ family protein -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 38906.73 Da        Isoelectric Point: 4.4949

>NTDB_id=1110939 ACNR93_RS02620 WP_039698469.1 496895..497980(+) (sepM) [Streptococcus equinus strain NM-2-29]
MTILNAFKGILKKIGRILYRLKWWILGIVGTAFIIFSLFCPLGYYVEMPGGAYDVRSVLTVNNKADKEDGSYNFVAVGVS
QATLAQLVYAWLTPHTEITTEAATTGGYSNADYMRINQYYMETSQNTATYQALTLAGKNVSLDYEGVYVLNVDKHSTFKG
LLHLADTVTGVNGKTFNSSAELMAYVADLDLGSDVTVQETSNGKSKEVSGKIIELPNGKNGIGIGLVDHTEVSSDVDVDF
ETSGFGGPSAGLMFTLDIYDQVNNEDLRKGRKIAGTGTINSDGSVGDIGGAGLKVVSAAKAGADIFFVPNNPVDEETKKE
NPDAKTNYQEAKEAAKDLDTDMKIVPVTTVQEAIDYLRSTD

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=1110939 ACNR93_RS02620 WP_039698469.1 496895..497980(+) (sepM) [Streptococcus equinus strain NM-2-29]
ATGACAATCTTAAACGCGTTTAAAGGGATTTTGAAAAAGATAGGTCGTATTTTGTATCGCTTAAAATGGTGGATTTTAGG
TATTGTTGGCACTGCTTTTATTATTTTCAGCCTTTTTTGCCCACTTGGTTATTATGTTGAAATGCCTGGTGGTGCTTATG
ATGTTCGCAGTGTTTTAACGGTTAATAATAAAGCTGATAAAGAAGATGGTTCTTATAATTTTGTAGCTGTTGGGGTTAGT
CAAGCAACGCTTGCTCAGTTGGTTTATGCTTGGTTGACGCCGCACACTGAAATTACAACTGAAGCAGCAACGACTGGTGG
TTACAGCAACGCAGACTATATGCGCATTAACCAATATTATATGGAAACTTCTCAAAATACAGCGACCTATCAAGCACTAA
CGTTGGCAGGAAAGAATGTTAGTTTGGATTATGAAGGTGTGTATGTTTTGAATGTTGATAAACATTCGACTTTCAAAGGT
CTGTTGCACCTTGCTGATACTGTGACAGGAGTTAACGGTAAAACTTTCAATAGTTCTGCAGAATTAATGGCTTATGTTGC
TGATTTAGATTTGGGTTCTGATGTGACTGTCCAAGAGACTTCTAACGGTAAGAGTAAAGAAGTTTCTGGGAAAATCATTG
AATTGCCAAATGGTAAAAATGGAATTGGTATCGGATTAGTCGACCATACAGAAGTTTCATCAGACGTTGATGTTGATTTT
GAAACGAGCGGTTTTGGCGGACCAAGTGCTGGTTTGATGTTTACTCTAGATATTTACGACCAAGTCAATAATGAAGATTT
GAGAAAAGGTCGTAAGATTGCTGGTACTGGTACGATTAATTCGGATGGTTCAGTTGGTGATATTGGCGGTGCTGGGTTAA
AAGTAGTGTCAGCTGCTAAGGCTGGTGCGGATATTTTCTTTGTACCGAATAATCCTGTGGATGAGGAAACGAAAAAAGAA
AATCCAGATGCTAAGACTAACTATCAAGAAGCAAAAGAAGCTGCTAAAGATTTAGATACTGACATGAAGATTGTTCCTGT
GACAACTGTTCAGGAAGCAATTGATTATTTGCGTAGCACAGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

66.962

93.906

0.629


Multiple sequence alignment