Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACNR93_RS02045 Genome accession   NZ_CP184736
Coordinates   384675..385400 (+) Length   241 a.a.
NCBI ID   WP_420543777.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 379675..390400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS02015 (ACNR93_02015) - 380094..381515 (+) 1422 WP_157339072.1 NCS2 family permease -
  ACNR93_RS02020 (ACNR93_02020) tsaE 381688..382131 (+) 444 WP_044023456.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACNR93_RS02025 (ACNR93_02025) - 382124..382636 (+) 513 WP_420543776.1 GNAT family N-acetyltransferase -
  ACNR93_RS02030 (ACNR93_02030) brpA 382647..383810 (+) 1164 WP_134775902.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACNR93_RS02035 (ACNR93_02035) - 383881..384195 (-) 315 WP_074567230.1 hypothetical protein -
  ACNR93_RS02040 (ACNR93_02040) - 384192..384611 (-) 420 WP_074480785.1 HIT family protein -
  ACNR93_RS02045 (ACNR93_02045) pptA 384675..385400 (+) 726 WP_420543777.1 ABC transporter ATP-binding protein Regulator
  ACNR93_RS02050 (ACNR93_02050) - 385403..386437 (+) 1035 WP_420543778.1 ABC transporter permease -
  ACNR93_RS02055 (ACNR93_02055) ccrZ 386471..387304 (+) 834 WP_045798213.1 cell cycle regulator CcrZ -
  ACNR93_RS02060 (ACNR93_02060) trmB 387304..387942 (+) 639 WP_021141720.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACNR93_RS02070 (ACNR93_02070) - 388244..389203 (+) 960 WP_420543779.1 diguanylate cyclase -
  ACNR93_RS02075 (ACNR93_02075) - 389209..390276 (+) 1068 WP_420543780.1 glycosyltransferase -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26763.05 Da        Isoelectric Point: 4.6132

>NTDB_id=1110934 ACNR93_RS02045 WP_420543777.1 384675..385400(+) (pptA) [Streptococcus equinus strain NM-2-29]
MLKIENLTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGLLTPYQGQITLDGLTLANNQSDYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLEFEAAMARAKELLKLFRLSDKLDWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTDLLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAVGNLAELREAFGQEDASLNDIYIALTKE
E

Nucleotide


Download         Length: 726 bp        

>NTDB_id=1110934 ACNR93_RS02045 WP_420543777.1 384675..385400(+) (pptA) [Streptococcus equinus strain NM-2-29]
ATGTTAAAAATTGAAAATCTTACAGGTGGGTATGTCAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
TGAACTTGTTGGATTAATTGGGCTAAATGGTGCTGGAAAATCAACAACCATAAATGAAATTATTGGACTTTTGACGCCTT
ATCAAGGTCAAATTACGCTAGATGGTTTGACTTTGGCTAATAATCAATCTGATTATCGTAAAAAAATCGGTTTTATTCCT
GAAACGCCAAGTTTATATGAAGAATTGACTTTGCGTGAGCATTTGGAAACTGTTGCTATGGCTTATGATCTTGAGTTTGA
GGCTGCTATGGCGCGTGCAAAAGAGTTGCTAAAACTTTTCCGTCTGTCTGATAAACTTGATTGGTTCCCGATTAATTTTT
CAAAAGGGATGAAGCAAAAGGTCATGATTATTTGTGCTTTCATGGTTAATCCAAGTTTATTTATCGTCGATGAACCGTTT
TTGGGGTTGGATCCGTTGGCTATTTCTGATTTGACAGATTTGTTGGCGCAAGAAAAGGCTAAAGGTAAGGCGATTTTGAT
GTCGACACACGTGTTAGATGCTGCTGAAAAGATGTGTGACCGTTTTGTGATTTTGCATCATGGTCAAGTAAGAGCTGTAG
GAAATTTAGCTGAATTGCGAGAAGCTTTCGGTCAGGAAGATGCCAGCTTGAATGACATTTACATAGCTTTGACTAAAGAG
GAATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

78.423

100

0.784
  pptA Streptococcus thermophilus LMD-9

77.178

100

0.772

Multiple sequence alignment