Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACOCHX_RS09970 | Genome accession | NZ_CP184613 |
| Coordinates | 2096042..2096422 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain CQPMC-AB10 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2091042..2101422
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCHX_RS09940 (ACOCHX_09940) | kdsB | 2091945..2092706 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACOCHX_RS09945 (ACOCHX_09945) | - | 2092718..2093698 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ACOCHX_RS09950 (ACOCHX_09950) | - | 2093710..2094051 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACOCHX_RS09955 (ACOCHX_09955) | - | 2094069..2094842 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACOCHX_RS09960 (ACOCHX_09960) | - | 2094880..2095488 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACOCHX_RS09965 (ACOCHX_09965) | - | 2095498..2096052 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACOCHX_RS09970 (ACOCHX_09970) | xcpV | 2096042..2096422 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACOCHX_RS09975 (ACOCHX_09975) | xcpW | 2096422..2097123 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACOCHX_RS09980 (ACOCHX_09980) | gspK | 2097123..2098082 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ACOCHX_RS09985 (ACOCHX_09985) | - | 2098313..2098909 (+) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACOCHX_RS09990 (ACOCHX_09990) | ung | 2098960..2099673 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACOCHX_RS09995 (ACOCHX_09995) | - | 2099670..2100794 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACOCHX_RS10000 (ACOCHX_10000) | tadA | 2100801..2101304 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1110366 ACOCHX_RS09970 WP_000836911.1 2096042..2096422(+) (xcpV) [Acinetobacter baumannii strain CQPMC-AB10]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1110366 ACOCHX_RS09970 WP_000836911.1 2096042..2096422(+) (xcpV) [Acinetobacter baumannii strain CQPMC-AB10]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |