Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | ACOCII_RS17525 | Genome accession | NZ_CP184609 |
| Coordinates | 3660187..3660513 (+) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain CQPMC-AB12 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3655187..3665513
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCII_RS17500 (ACOCII_17500) | hemC | 3655804..3656721 (+) | 918 | WP_031944971.1 | hydroxymethylbilane synthase | - |
| ACOCII_RS17505 (ACOCII_17505) | - | 3656726..3657493 (+) | 768 | WP_000897421.1 | uroporphyrinogen-III synthase | - |
| ACOCII_RS17510 (ACOCII_17510) | - | 3657502..3658341 (+) | 840 | WP_001230204.1 | hypothetical protein | - |
| ACOCII_RS17515 (ACOCII_17515) | - | 3658351..3659544 (+) | 1194 | WP_000681783.1 | hypothetical protein | - |
| ACOCII_RS17520 (ACOCII_17520) | - | 3659552..3659992 (+) | 441 | WP_000661570.1 | acyl-CoA thioesterase | - |
| ACOCII_RS17525 (ACOCII_17525) | hns | 3660187..3660513 (+) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| ACOCII_RS17530 (ACOCII_17530) | gspN | 3660846..3661589 (+) | 744 | WP_000730343.1 | type II secretion system protein N | - |
| ACOCII_RS17535 (ACOCII_17535) | - | 3661589..3662425 (+) | 837 | WP_000870033.1 | type II secretion system protein N | - |
| ACOCII_RS17540 (ACOCII_17540) | gspD | 3662467..3664743 (+) | 2277 | WP_001196426.1 | type II secretion system secretin GspD | - |
| ACOCII_RS17545 (ACOCII_17545) | - | 3664784..3665413 (+) | 630 | WP_000219967.1 | FHA domain-containing protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=1110290 ACOCII_RS17525 WP_000801427.1 3660187..3660513(+) (hns) [Acinetobacter baumannii strain CQPMC-AB12]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=1110290 ACOCII_RS17525 WP_000801427.1 3660187..3660513(+) (hns) [Acinetobacter baumannii strain CQPMC-AB12]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |