Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | ACOCIG_RS17360 | Genome accession | NZ_CP184607 |
| Coordinates | 3618856..3619182 (-) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain CQPMC-AB14 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3613856..3624182
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCIG_RS17340 (ACOCIG_17340) | - | 3613956..3614585 (-) | 630 | WP_000219967.1 | FHA domain-containing protein | - |
| ACOCIG_RS17345 (ACOCIG_17345) | gspD | 3614626..3616902 (-) | 2277 | WP_001196426.1 | type II secretion system secretin GspD | - |
| ACOCIG_RS17350 (ACOCIG_17350) | - | 3616944..3617780 (-) | 837 | WP_000870033.1 | type II secretion system protein N | - |
| ACOCIG_RS17355 (ACOCIG_17355) | gspN | 3617780..3618523 (-) | 744 | WP_000730343.1 | type II secretion system protein N | - |
| ACOCIG_RS17360 (ACOCIG_17360) | hns | 3618856..3619182 (-) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| ACOCIG_RS17365 (ACOCIG_17365) | - | 3619377..3619817 (-) | 441 | WP_000661570.1 | acyl-CoA thioesterase | - |
| ACOCIG_RS17370 (ACOCIG_17370) | - | 3619825..3621018 (-) | 1194 | WP_000681783.1 | hypothetical protein | - |
| ACOCIG_RS17375 (ACOCIG_17375) | - | 3621028..3621867 (-) | 840 | WP_001230204.1 | hypothetical protein | - |
| ACOCIG_RS17380 (ACOCIG_17380) | - | 3621876..3622643 (-) | 768 | WP_000897421.1 | uroporphyrinogen-III synthase | - |
| ACOCIG_RS17385 (ACOCIG_17385) | hemC | 3622648..3623565 (-) | 918 | WP_031944971.1 | hydroxymethylbilane synthase | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=1110240 ACOCIG_RS17360 WP_000801427.1 3618856..3619182(-) (hns) [Acinetobacter baumannii strain CQPMC-AB14]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=1110240 ACOCIG_RS17360 WP_000801427.1 3618856..3619182(-) (hns) [Acinetobacter baumannii strain CQPMC-AB14]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |