Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | ACOCH5_RS17510 | Genome accession | NZ_CP184605 |
| Coordinates | 3660170..3660496 (+) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain CQPMC-AB15 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3655170..3665496
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCH5_RS17485 (ACOCH5_17485) | hemC | 3655787..3656704 (+) | 918 | WP_031944971.1 | hydroxymethylbilane synthase | - |
| ACOCH5_RS17490 (ACOCH5_17490) | - | 3656709..3657476 (+) | 768 | WP_000897421.1 | uroporphyrinogen-III synthase | - |
| ACOCH5_RS17495 (ACOCH5_17495) | - | 3657485..3658324 (+) | 840 | WP_001230204.1 | hypothetical protein | - |
| ACOCH5_RS17500 (ACOCH5_17500) | - | 3658334..3659527 (+) | 1194 | WP_000681783.1 | hypothetical protein | - |
| ACOCH5_RS17505 (ACOCH5_17505) | - | 3659535..3659975 (+) | 441 | WP_000661570.1 | acyl-CoA thioesterase | - |
| ACOCH5_RS17510 (ACOCH5_17510) | hns | 3660170..3660496 (+) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| ACOCH5_RS17515 (ACOCH5_17515) | gspN | 3660829..3661572 (+) | 744 | WP_000730343.1 | type II secretion system protein N | - |
| ACOCH5_RS17520 (ACOCH5_17520) | - | 3661572..3662408 (+) | 837 | WP_000870033.1 | type II secretion system protein N | - |
| ACOCH5_RS17525 (ACOCH5_17525) | gspD | 3662450..3664726 (+) | 2277 | WP_001196426.1 | type II secretion system secretin GspD | - |
| ACOCH5_RS17530 (ACOCH5_17530) | - | 3664767..3665396 (+) | 630 | WP_000219967.1 | FHA domain-containing protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=1110195 ACOCH5_RS17510 WP_000801427.1 3660170..3660496(+) (hns) [Acinetobacter baumannii strain CQPMC-AB15]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=1110195 ACOCH5_RS17510 WP_000801427.1 3660170..3660496(+) (hns) [Acinetobacter baumannii strain CQPMC-AB15]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |