Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACOCH6_RS09955 | Genome accession | NZ_CP184603 |
| Coordinates | 2096045..2096425 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain CQPMC-AB16 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2091045..2101425
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCH6_RS09925 (ACOCH6_09925) | kdsB | 2091948..2092709 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACOCH6_RS09930 (ACOCH6_09930) | - | 2092721..2093701 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ACOCH6_RS09935 (ACOCH6_09935) | - | 2093713..2094054 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACOCH6_RS09940 (ACOCH6_09940) | - | 2094072..2094845 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACOCH6_RS09945 (ACOCH6_09945) | - | 2094883..2095491 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACOCH6_RS09950 (ACOCH6_09950) | - | 2095501..2096055 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACOCH6_RS09955 (ACOCH6_09955) | xcpV | 2096045..2096425 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACOCH6_RS09960 (ACOCH6_09960) | xcpW | 2096425..2097126 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACOCH6_RS09965 (ACOCH6_09965) | gspK | 2097126..2098085 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ACOCH6_RS09970 (ACOCH6_09970) | - | 2098316..2098912 (+) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ACOCH6_RS09975 (ACOCH6_09975) | ung | 2098963..2099676 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACOCH6_RS09980 (ACOCH6_09980) | - | 2099673..2100797 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACOCH6_RS09985 (ACOCH6_09985) | tadA | 2100804..2101307 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1110129 ACOCH6_RS09955 WP_000836911.1 2096045..2096425(+) (xcpV) [Acinetobacter baumannii strain CQPMC-AB16]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1110129 ACOCH6_RS09955 WP_000836911.1 2096045..2096425(+) (xcpV) [Acinetobacter baumannii strain CQPMC-AB16]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |