Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | ACOCIH_RS17335 | Genome accession | NZ_CP184601 |
| Coordinates | 3618848..3619174 (-) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain CQPMC-AB17 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3613848..3624174
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCIH_RS17315 (ACOCIH_17315) | - | 3613948..3614577 (-) | 630 | WP_000219967.1 | FHA domain-containing protein | - |
| ACOCIH_RS17320 (ACOCIH_17320) | gspD | 3614618..3616894 (-) | 2277 | WP_001196426.1 | type II secretion system secretin GspD | - |
| ACOCIH_RS17325 (ACOCIH_17325) | - | 3616936..3617772 (-) | 837 | WP_000870033.1 | type II secretion system protein N | - |
| ACOCIH_RS17330 (ACOCIH_17330) | gspN | 3617772..3618515 (-) | 744 | WP_000730343.1 | type II secretion system protein N | - |
| ACOCIH_RS17335 (ACOCIH_17335) | hns | 3618848..3619174 (-) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| ACOCIH_RS17340 (ACOCIH_17340) | - | 3619369..3619809 (-) | 441 | WP_000661570.1 | acyl-CoA thioesterase | - |
| ACOCIH_RS17345 (ACOCIH_17345) | - | 3619817..3621010 (-) | 1194 | WP_000681783.1 | hypothetical protein | - |
| ACOCIH_RS17350 (ACOCIH_17350) | - | 3621020..3621859 (-) | 840 | WP_001230204.1 | hypothetical protein | - |
| ACOCIH_RS17355 (ACOCIH_17355) | - | 3621868..3622635 (-) | 768 | WP_000897421.1 | uroporphyrinogen-III synthase | - |
| ACOCIH_RS17360 (ACOCIH_17360) | hemC | 3622640..3623557 (-) | 918 | WP_031944971.1 | hydroxymethylbilane synthase | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=1110098 ACOCIH_RS17335 WP_000801427.1 3618848..3619174(-) (hns) [Acinetobacter baumannii strain CQPMC-AB17]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=1110098 ACOCIH_RS17335 WP_000801427.1 3618848..3619174(-) (hns) [Acinetobacter baumannii strain CQPMC-AB17]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |