Detailed information NTG1110036

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACOCIC_RS09940
• Genome accession: NZ_CP184599
• Coordinates: 2096416..2097117 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain CQPMC-AB18
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2091416..2102117

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACOCIC_RS09905 (ACOCIC_09905)	kdsB	2091939..2092700 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACOCIC_RS09910 (ACOCIC_09910)	-	2092712..2093692 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACOCIC_RS09915 (ACOCIC_09915)	-	2093704..2094045 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACOCIC_RS09920 (ACOCIC_09920)	-	2094063..2094836 (+)	774	WP_000497298.1	TatD family hydrolase	-
ACOCIC_RS09925 (ACOCIC_09925)	-	2094874..2095482 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACOCIC_RS09930 (ACOCIC_09930)	-	2095492..2096046 (+)	555	WP_000841373.1	type II secretion system protein	-
ACOCIC_RS09935 (ACOCIC_09935)	xcpV	2096036..2096416 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACOCIC_RS09940 (ACOCIC_09940)	xcpW	2096416..2097117 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACOCIC_RS09945 (ACOCIC_09945)	gspK	2097117..2098076 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACOCIC_RS09950 (ACOCIC_09950)	-	2098307..2098903 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
ACOCIC_RS09955 (ACOCIC_09955)	ung	2098954..2099667 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACOCIC_RS09960 (ACOCIC_09960)	-	2099664..2100788 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACOCIC_RS09965 (ACOCIC_09965)	tadA	2100795..2101298 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACOCIC_RS09970 (ACOCIC_09970)	-	2101368..2101811 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1110036 ACOCIC_RS09940 WP_000594589.1 2096416..2097117(+) (xcpW) [Acinetobacter baumannii strain CQPMC-AB18]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1110036 ACOCIC_RS09940 WP_000594589.1 2096416..2097117(+) (xcpW) [Acinetobacter baumannii strain CQPMC-AB18]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996