Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | ACOCIB_RS17320 | Genome accession | NZ_CP184593 |
| Coordinates | 3618828..3619154 (-) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain CQPMC-AB22 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3613828..3624154
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCIB_RS17300 (ACOCIB_17300) | - | 3613928..3614557 (-) | 630 | WP_000219967.1 | FHA domain-containing protein | - |
| ACOCIB_RS17305 (ACOCIB_17305) | gspD | 3614598..3616874 (-) | 2277 | WP_001196426.1 | type II secretion system secretin GspD | - |
| ACOCIB_RS17310 (ACOCIB_17310) | - | 3616916..3617752 (-) | 837 | WP_000870033.1 | type II secretion system protein N | - |
| ACOCIB_RS17315 (ACOCIB_17315) | gspN | 3617752..3618495 (-) | 744 | WP_000730343.1 | type II secretion system protein N | - |
| ACOCIB_RS17320 (ACOCIB_17320) | hns | 3618828..3619154 (-) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| ACOCIB_RS17325 (ACOCIB_17325) | - | 3619349..3619789 (-) | 441 | WP_000661570.1 | acyl-CoA thioesterase | - |
| ACOCIB_RS17330 (ACOCIB_17330) | - | 3619797..3620990 (-) | 1194 | WP_000681783.1 | hypothetical protein | - |
| ACOCIB_RS17335 (ACOCIB_17335) | - | 3621000..3621839 (-) | 840 | WP_001230204.1 | hypothetical protein | - |
| ACOCIB_RS17340 (ACOCIB_17340) | - | 3621848..3622615 (-) | 768 | WP_000897421.1 | uroporphyrinogen-III synthase | - |
| ACOCIB_RS17345 (ACOCIB_17345) | hemC | 3622620..3623537 (-) | 918 | WP_031944971.1 | hydroxymethylbilane synthase | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=1109957 ACOCIB_RS17320 WP_000801427.1 3618828..3619154(-) (hns) [Acinetobacter baumannii strain CQPMC-AB22]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=1109957 ACOCIB_RS17320 WP_000801427.1 3618828..3619154(-) (hns) [Acinetobacter baumannii strain CQPMC-AB22]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |