Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ACOCH0_RS01570 | Genome accession | NZ_CP184585 |
| Coordinates | 338015..338488 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214061.1 | Uniprot ID | A0A219CC01 |
| Organism | Acinetobacter baumannii strain CQPMC-AB27 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 333015..343488
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCH0_RS01545 (ACOCH0_01545) | - | 333479..335584 (-) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
| ACOCH0_RS01550 (ACOCH0_01550) | - | 335624..335753 (-) | 130 | Protein_297 | hypothetical protein | - |
| ACOCH0_RS01555 (ACOCH0_01555) | rpoZ | 335792..336070 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ACOCH0_RS01560 (ACOCH0_01560) | gmk | 336143..336772 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| ACOCH0_RS01565 (ACOCH0_01565) | ispH | 336895..337845 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ACOCH0_RS01570 (ACOCH0_01570) | fimU | 338015..338488 (+) | 474 | WP_001214061.1 | pilus assembly FimT family protein | Machinery gene |
| ACOCH0_RS01575 (ACOCH0_01575) | pilV | 338482..339042 (+) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| ACOCH0_RS01580 (ACOCH0_01580) | pilW | 339043..340044 (+) | 1002 | WP_230602216.1 | PilW family protein | Machinery gene |
| ACOCH0_RS01585 (ACOCH0_01585) | pilX | 340041..340859 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16836.40 Da Isoelectric Point: 8.5355
>NTDB_id=1109782 ACOCH0_RS01570 WP_001214061.1 338015..338488(+) (fimU) [Acinetobacter baumannii strain CQPMC-AB27]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
Nucleotide
Download Length: 474 bp
>NTDB_id=1109782 ACOCH0_RS01570 WP_001214061.1 338015..338488(+) (fimU) [Acinetobacter baumannii strain CQPMC-AB27]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |