Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | ACOCH9_RS17530 | Genome accession | NZ_CP184583 |
| Coordinates | 3660197..3660523 (+) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain CQPMC-AB28 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3655197..3665523
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACOCH9_RS17505 (ACOCH9_17505) | hemC | 3655814..3656731 (+) | 918 | WP_031944971.1 | hydroxymethylbilane synthase | - |
| ACOCH9_RS17510 (ACOCH9_17510) | - | 3656736..3657503 (+) | 768 | WP_000897421.1 | uroporphyrinogen-III synthase | - |
| ACOCH9_RS17515 (ACOCH9_17515) | - | 3657512..3658351 (+) | 840 | WP_001230204.1 | hypothetical protein | - |
| ACOCH9_RS17520 (ACOCH9_17520) | - | 3658361..3659554 (+) | 1194 | WP_000681783.1 | hypothetical protein | - |
| ACOCH9_RS17525 (ACOCH9_17525) | - | 3659562..3660002 (+) | 441 | WP_000661570.1 | acyl-CoA thioesterase | - |
| ACOCH9_RS17530 (ACOCH9_17530) | hns | 3660197..3660523 (+) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| ACOCH9_RS17535 (ACOCH9_17535) | gspN | 3660856..3661599 (+) | 744 | WP_000730343.1 | type II secretion system protein N | - |
| ACOCH9_RS17540 (ACOCH9_17540) | - | 3661599..3662435 (+) | 837 | WP_000870033.1 | type II secretion system protein N | - |
| ACOCH9_RS17545 (ACOCH9_17545) | gspD | 3662477..3664753 (+) | 2277 | WP_001196426.1 | type II secretion system secretin GspD | - |
| ACOCH9_RS17550 (ACOCH9_17550) | - | 3664794..3665423 (+) | 630 | WP_000219967.1 | FHA domain-containing protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=1109770 ACOCH9_RS17530 WP_000801427.1 3660197..3660523(+) (hns) [Acinetobacter baumannii strain CQPMC-AB28]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=1109770 ACOCH9_RS17530 WP_000801427.1 3660197..3660523(+) (hns) [Acinetobacter baumannii strain CQPMC-AB28]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |