Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ACOCJA_RS00455 Genome accession   NZ_CP184565
Coordinates   81158..82201 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain CBTW2018043     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 76158..87201
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOCJA_RS00425 (ACOCJA_00425) - 76773..76883 (+) 111 WP_014937049.1 hypothetical protein -
  ACOCJA_RS00430 (ACOCJA_00430) - 76912..77325 (+) 414 WP_025174370.1 hypothetical protein -
  ACOCJA_RS00435 (ACOCJA_00435) - 77514..78500 (-) 987 WP_420228253.1 FUSC family protein -
  ACOCJA_RS00440 (ACOCJA_00440) map 79084..79842 (+) 759 WP_000636145.1 type I methionyl aminopeptidase -
  ACOCJA_RS00445 (ACOCJA_00445) - 80059..80445 (+) 387 WP_001110182.1 hypothetical protein -
  ACOCJA_RS00450 (ACOCJA_00450) liaF 80460..81161 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  ACOCJA_RS00455 (ACOCJA_00455) vraS 81158..82201 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  ACOCJA_RS00460 (ACOCJA_00460) vraR 82191..82820 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  ACOCJA_RS00465 (ACOCJA_00465) - 82933..84150 (-) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  ACOCJA_RS00470 (ACOCJA_00470) - 84428..84703 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  ACOCJA_RS00475 (ACOCJA_00475) - 84710..85174 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  ACOCJA_RS00480 (ACOCJA_00480) - 85321..85521 (+) 201 WP_000180460.1 DUF1128 family protein -
  ACOCJA_RS00485 (ACOCJA_00485) - 85524..86780 (+) 1257 WP_001793428.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=1109608 ACOCJA_RS00455 WP_001017131.1 81158..82201(+) (vraS) [Staphylococcus aureus strain CBTW2018043]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1109608 ACOCJA_RS00455 WP_001017131.1 81158..82201(+) (vraS) [Staphylococcus aureus strain CBTW2018043]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTTCTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAATTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAATTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATCAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment