Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ACOCI8_RS06500 Genome accession   NZ_CP184563
Coordinates   1313335..1314378 (+) Length   347 a.a.
NCBI ID   WP_096777928.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SCTW2018065     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1308335..1319378
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOCI8_RS06470 (ACOCI8_06470) - 1308950..1309060 (+) 111 WP_014937049.1 hypothetical protein -
  ACOCI8_RS06475 (ACOCI8_06475) - 1309089..1309502 (+) 414 WP_025174370.1 hypothetical protein -
  ACOCI8_RS06480 (ACOCI8_06480) - 1309691..1310677 (-) 987 WP_000999712.1 FUSC family protein -
  ACOCI8_RS06485 (ACOCI8_06485) map 1311261..1312019 (+) 759 WP_000636145.1 type I methionyl aminopeptidase -
  ACOCI8_RS06490 (ACOCI8_06490) - 1312236..1312622 (+) 387 WP_096002295.1 hypothetical protein -
  ACOCI8_RS06495 (ACOCI8_06495) liaF 1312637..1313338 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  ACOCI8_RS06500 (ACOCI8_06500) vraS 1313335..1314378 (+) 1044 WP_096777928.1 sensor histidine kinase Regulator
  ACOCI8_RS06505 (ACOCI8_06505) vraR 1314368..1314997 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  ACOCI8_RS06510 (ACOCI8_06510) - 1315110..1316327 (-) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  ACOCI8_RS06515 (ACOCI8_06515) - 1316605..1316880 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  ACOCI8_RS06520 (ACOCI8_06520) - 1316887..1317351 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  ACOCI8_RS06525 (ACOCI8_06525) - 1317498..1317698 (+) 201 WP_000180460.1 DUF1128 family protein -
  ACOCI8_RS06530 (ACOCI8_06530) - 1317701..1318957 (+) 1257 WP_001793428.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40062.55 Da        Isoelectric Point: 6.0577

>NTDB_id=1109574 ACOCI8_RS06500 WP_096777928.1 1313335..1314378(+) (vraS) [Staphylococcus aureus strain SCTW2018065]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILMCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1109574 ACOCI8_RS06500 WP_096777928.1 1313335..1314378(+) (vraS) [Staphylococcus aureus strain SCTW2018065]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTAATGTGTATTATTGTTGGTTCGGTTCTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAATTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAATTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997


Multiple sequence alignment