Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACN079_RS27720 Genome accession   NZ_CP184478
Coordinates   6160226..6160654 (+) Length   142 a.a.
NCBI ID   WP_003206467.1    Uniprot ID   A0A0F4XQR2
Organism   Pseudomonas sp. ABY48     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6155226..6165654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN079_RS27700 (ACN079_27700) - 6155815..6156801 (+) 987 WP_420232703.1 type II secretion system F family protein -
  ACN079_RS27705 (ACN079_27705) - 6156829..6157794 (+) 966 WP_420232704.1 type II secretion system F family protein -
  ACN079_RS27710 (ACN079_27710) - 6158075..6158971 (-) 897 WP_420232705.1 TonB family protein -
  ACN079_RS27715 (ACN079_27715) gshB 6159048..6160001 (-) 954 WP_420232706.1 glutathione synthase -
  ACN079_RS27720 (ACN079_27720) pilG 6160226..6160654 (+) 429 WP_003206467.1 response regulator Regulator
  ACN079_RS27725 (ACN079_27725) pilH 6160703..6161068 (+) 366 WP_256229991.1 twitching motility response regulator PilH -
  ACN079_RS27730 (ACN079_27730) - 6161079..6161618 (+) 540 WP_420232707.1 chemotaxis protein CheW -
  ACN079_RS27735 (ACN079_27735) - 6161791..6163851 (+) 2061 WP_420232708.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15493.95 Da        Isoelectric Point: 7.4360

>NTDB_id=1108436 ACN079_RS27720 WP_003206467.1 6160226..6160654(+) (pilG) [Pseudomonas sp. ABY48]
MAEHLTQQQPSALKVMVIDDSKTIRRTAETLLRNVGCEVITAVDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKN
NSAFKATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLGAIQAHVPGFAAVQPHQAH

Nucleotide


Download         Length: 429 bp        

>NTDB_id=1108436 ACN079_RS27720 WP_003206467.1 6160226..6160654(+) (pilG) [Pseudomonas sp. ABY48]
ATGGCAGAGCATCTCACGCAGCAGCAACCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAGACCATCCGCCGCAC
CGCCGAAACCTTGCTGCGCAACGTGGGCTGCGAGGTGATCACGGCCGTCGATGGCTTCGATGCCCTGGCCAAGATCGCCG
ACCATCATCCGGGCATCATTTTTGTCGACATCATGATGCCGCGCCTCGATGGCTACCAGACCTGTGCCCTGATCAAGAAC
AACAGCGCGTTCAAGGCCACGCCGGTGATCATGCTGTCGTCTCGGGATGGGTTGTTCGACAAGGCCAAGGGGCGCATCGT
CGGTTCCGATCAGTTTTTGACCAAGCCGTTCAGCAAGGAAGAACTGCTGGGCGCGATACAGGCCCATGTCCCGGGCTTTG
CCGCTGTCCAGCCGCACCAGGCACATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0F4XQR2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.966

83.099

0.648

Multiple sequence alignment