Detailed information NTG0110841

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACKTTZ_RS08980
• Genome accession: NZ_AP035792
• Coordinates: 1998795..1999904 (-)
• Length: 369 a.a.
• NCBI ID: WP_407848433.1
• Uniprot ID: -
• Organism: Chryseobacterium sp. KCF3-3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1993795..2004904

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKTTZ_RS08950 (KCF3NO3_17380)	-	1994185..1994565 (-)	381	WP_034691857.1	group III truncated hemoglobin	-
ACKTTZ_RS08955 (KCF3NO3_17390)	-	1994705..1995676 (+)	972	WP_407848429.1	ion channel	-
ACKTTZ_RS08960 (KCF3NO3_17400)	-	1995677..1996165 (+)	489	WP_079243811.1	YkgJ family cysteine cluster protein	-
ACKTTZ_RS08965 (KCF3NO3_17410)	-	1996402..1996704 (+)	303	WP_034691849.1	hypothetical protein	-
ACKTTZ_RS08970 (KCF3NO3_17420)	-	1996748..1997119 (-)	372	WP_253315929.1	iron chaperone	-
ACKTTZ_RS08975 (KCF3NO3_17430)	gdhA	1997246..1998604 (-)	1359	WP_034691843.1	NADP-specific glutamate dehydrogenase	-
ACKTTZ_RS08980 (KCF3NO3_17440)	dprA	1998795..1999904 (-)	1110	WP_407848433.1	DNA-processing protein DprA	Machinery gene
ACKTTZ_RS08985 (KCF3NO3_17450)	-	1999938..2000705 (-)	768	WP_079240009.1	rhomboid family intramembrane serine protease	-
ACKTTZ_RS08990 (KCF3NO3_17460)	-	2000957..2001883 (+)	927	WP_034691835.1	DUF3078 domain-containing protein	-
ACKTTZ_RS08995 (KCF3NO3_17470)	-	2002111..2003034 (+)	924	WP_407848436.1	DUF3078 domain-containing protein	-
ACKTTZ_RS09000 (KCF3NO3_17480)	sufD	2003110..2004417 (-)	1308	WP_034692056.1	Fe-S cluster assembly protein SufD	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41146.93 Da
• Isoelectric Point: 8.0693

>NTDB_id=110841 ACKTTZ_RS08980 WP_407848433.1 1998795..1999904(-) (dprA) [Chryseobacterium sp. KCF3-3]
MTSEEYLYAIALRECSQIGDIHFHKLIRTFGSAQEAWKRAKKEYKQLEGIGQKTVSDIGNKSHLKFAEEELNFCEKNNIQ
IRLKHLKEIPSLLNECNDAPAILYQKGNIGNTQPKVSIVGTRNMTTYGKQFIEDFFKATQSSKYTSVSGLALGVDKEVHE
QSICHQKPTVAVLAHGFQYLYPATNRKLSEKILQEGGALITEFSSSRKPDRENFIQRNRIVAGISPATIVVETGFGGGSV
STAAFANDYNRDVFALPGKITESSSQGCNQLIFHNKATAISTIKDLIGLLGLNDPKEKMEELFPHSEKSIQLSDSQNLIY
QSIKDHPQISLDDLSQKIEVSTHKILPIILELELLGKVKSFSGRQFIAI

Nucleotide

• Length: 1110 bp

>NTDB_id=110841 ACKTTZ_RS08980 WP_407848433.1 1998795..1999904(-) (dprA) [Chryseobacterium sp. KCF3-3]
ATGACCTCCGAAGAATACTTATATGCCATCGCCCTCCGCGAATGCAGCCAGATTGGCGATATTCATTTTCATAAACTTAT
CCGTACTTTCGGAAGCGCTCAGGAAGCCTGGAAAAGAGCAAAAAAAGAGTATAAACAACTGGAAGGGATAGGACAGAAAA
CAGTTTCAGATATTGGAAATAAGTCTCATTTGAAATTCGCAGAAGAAGAATTAAATTTTTGCGAAAAAAATAATATTCAA
ATCAGGTTAAAACATCTCAAAGAAATCCCTTCTCTACTCAATGAATGTAATGATGCACCGGCTATTCTTTATCAAAAAGG
GAATATCGGGAATACACAACCAAAAGTAAGTATTGTAGGAACCCGAAATATGACAACTTATGGAAAACAGTTTATTGAAG
ACTTCTTCAAAGCAACACAATCTTCAAAATATACATCTGTAAGCGGTCTTGCTTTAGGAGTTGATAAAGAAGTTCACGAA
CAGTCTATTTGTCATCAAAAACCCACTGTAGCAGTTCTTGCACATGGTTTTCAATATTTATATCCGGCAACAAACAGAAA
ACTTTCTGAAAAAATTTTACAGGAAGGAGGTGCATTAATAACGGAGTTCAGCTCTTCCAGAAAACCTGACCGGGAAAACT
TCATCCAAAGAAACAGAATCGTGGCAGGAATATCTCCTGCAACTATTGTAGTGGAAACCGGTTTTGGAGGAGGTTCTGTG
AGCACAGCAGCCTTTGCCAATGATTATAACCGTGATGTTTTTGCACTCCCTGGAAAAATCACGGAAAGCAGCAGCCAGGG
ATGTAATCAGCTGATTTTCCACAATAAAGCAACCGCTATTTCTACCATAAAAGATCTTATCGGACTCCTCGGATTAAATG
ATCCGAAAGAAAAAATGGAAGAGTTATTTCCCCACAGCGAGAAAAGCATACAATTGTCTGATAGTCAGAATTTAATATAT
CAATCTATCAAAGACCATCCTCAGATTTCTCTGGATGATCTGTCACAGAAAATTGAAGTTTCTACTCACAAAATTTTGCC
AATAATTTTAGAATTGGAACTTTTAGGGAAAGTAAAATCGTTTTCCGGGAGGCAATTTATAGCAATTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

• DprA winged helix domain (DprA_WH) (307-363)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	50.546	99.187	0.501