Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ACN19N_RS13000 Genome accession   NZ_CP184160
Coordinates   2699813..2700700 (-) Length   295 a.a.
NCBI ID   WP_269228818.1    Uniprot ID   A0A9E9L5Q0
Organism   Acinetobacter sp. LF10     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2694813..2705700
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN19N_RS12980 (ACN19N_12980) - 2695168..2696244 (+) 1077 WP_420001490.1 PhoH family protein -
  ACN19N_RS12985 (ACN19N_12985) ybeY 2696473..2696958 (+) 486 WP_241340123.1 rRNA maturation RNase YbeY -
  ACN19N_RS12990 (ACN19N_12990) - 2696970..2697269 (+) 300 WP_269239069.1 antibiotic biosynthesis monooxygenase family protein -
  ACN19N_RS12995 (ACN19N_12995) - 2697342..2699534 (-) 2193 WP_420001491.1 TonB-dependent siderophore receptor -
  ACN19N_RS13000 (ACN19N_13000) tonB2 2699813..2700700 (-) 888 WP_269228818.1 energy transducer TonB Machinery gene
  ACN19N_RS13005 (ACN19N_13005) - 2700988..2701668 (+) 681 WP_269239067.1 hypothetical protein -
  ACN19N_RS13010 (ACN19N_13010) - 2701864..2702568 (+) 705 WP_420001492.1 DUF3108 domain-containing protein -
  ACN19N_RS13015 (ACN19N_13015) - 2702657..2703232 (+) 576 WP_004658926.1 xanthine phosphoribosyltransferase -
  ACN19N_RS13020 (ACN19N_13020) - 2703278..2704102 (-) 825 WP_420001493.1 YwqG family protein -
  ACN19N_RS13025 (ACN19N_13025) thyA 2704274..2705116 (+) 843 WP_420001494.1 thymidylate synthase -
  ACN19N_RS13030 (ACN19N_13030) - 2705138..2705647 (+) 510 WP_018677325.1 dihydrofolate reductase -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 33619.21 Da        Isoelectric Point: 7.5185

>NTDB_id=1108023 ACN19N_RS13000 WP_269228818.1 2699813..2700700(-) (tonB2) [Acinetobacter sp. LF10]
MWNKRNFRSVLSPYWWQDPIFIGAVALAMLLHGAVLAIQFAMPSPTDTSTKEIAVTVRTSQEKVKDADFLAQADQKGSGD
FREAHRMSSDMPAPMEADATTGESELESLEKVQQKRELKFEEKVLMTVLSWQKQAEQTERKKTLDELQSQFQAKAAMVAS
LEAQYLQHQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQKVELYGNRYYPDEAKQRHLSGEVRLMVILNAEGGIRAIRL
IESSGHPILDEAAKASVRRGAPFGPFDNNMKKDISELRIIRTWRFDPVDAEFEVH

Nucleotide


Download         Length: 888 bp        

>NTDB_id=1108023 ACN19N_RS13000 WP_269228818.1 2699813..2700700(-) (tonB2) [Acinetobacter sp. LF10]
ATGTGGAATAAAAGAAATTTTCGTTCAGTACTGTCCCCTTACTGGTGGCAAGATCCAATTTTTATCGGGGCAGTTGCGTT
AGCGATGCTTCTACATGGTGCTGTGCTTGCAATTCAGTTCGCAATGCCATCACCTACAGATACATCAACCAAAGAAATCG
CAGTTACGGTTCGTACAAGTCAAGAAAAAGTCAAAGATGCCGACTTCTTGGCGCAAGCTGATCAAAAAGGTTCAGGTGAT
TTTCGTGAAGCACATCGTATGTCGAGTGATATGCCAGCTCCGATGGAAGCAGATGCGACAACAGGAGAGTCAGAGCTCGA
GAGTTTAGAGAAAGTCCAGCAAAAACGAGAATTAAAATTTGAAGAAAAAGTGCTCATGACGGTTTTAAGCTGGCAGAAGC
AAGCAGAGCAAACTGAACGTAAAAAAACCTTAGATGAGTTACAGAGTCAATTTCAAGCCAAAGCCGCGATGGTTGCGAGC
TTGGAAGCACAATATTTACAACATCAGCAAAATTTTAGTCGTAAACAACGTATTAAAACAGTAGATGGGATTCAGGCAAA
ACAAGATGCATCAGCAGCTTATCTTGATAAATTTCGTCAGAAAGTTGAACTATATGGTAATCGTTATTATCCAGATGAAG
CGAAACAACGACATTTATCGGGTGAAGTGCGTTTAATGGTCATTCTGAATGCCGAAGGTGGAATTCGAGCAATTCGTCTT
ATAGAAAGTTCTGGACATCCCATTTTAGATGAAGCGGCAAAAGCTTCGGTGCGCCGTGGAGCACCTTTTGGACCCTTTGA
TAACAATATGAAAAAGGACATTTCTGAATTACGAATTATTCGAACATGGCGCTTTGATCCTGTCGATGCGGAATTTGAAG
TACATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-273)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

76.61

100

0.766

Multiple sequence alignment