Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACGJAX_RS04395 Genome accession   NZ_AP035776
Coordinates   924854..925258 (-) Length   134 a.a.
NCBI ID   WP_090326068.1    Uniprot ID   -
Organism   Pseudomonas moorei strain m318     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 919854..930258
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGJAX_RS04380 (PMm318_A08480) - 921691..923751 (-) 2061 WP_390957545.1 methyl-accepting chemotaxis protein -
  ACGJAX_RS04385 (PMm318_A08490) - 923881..924420 (-) 540 WP_090326063.1 chemotaxis protein CheW -
  ACGJAX_RS04390 (PMm318_A08500) pilH 924431..924796 (-) 366 WP_090326066.1 twitching motility response regulator PilH -
  ACGJAX_RS04395 (PMm318_A08510) pilG 924854..925258 (-) 405 WP_090326068.1 twitching motility response regulator PilG Regulator
  ACGJAX_RS04400 (PMm318_A08520) gshB 925619..926572 (+) 954 WP_247254451.1 glutathione synthase -
  ACGJAX_RS04405 (PMm318_A08540) - 926637..927536 (+) 900 WP_247254450.1 energy transducer TonB -
  ACGJAX_RS04410 (PMm318_A08550) - 927741..928313 (+) 573 WP_090326075.1 YqgE/AlgH family protein -
  ACGJAX_RS04415 (PMm318_A08560) ruvX 928313..928750 (+) 438 WP_090326077.1 Holliday junction resolvase RuvX -
  ACGJAX_RS04420 (PMm318_A08570) pyrR 928845..929348 (+) 504 WP_090326079.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14600.03 Da        Isoelectric Point: 7.2441

>NTDB_id=110772 ACGJAX_RS04395 WP_090326068.1 924854..925258(-) (pilG) [Pseudomonas moorei strain m318]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNPAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=110772 ACGJAX_RS04395 WP_090326068.1 924854..925258(-) (pilG) [Pseudomonas moorei strain m318]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTCATCGACGATTCGAAGACGATTCGCCGAACCGCCGAAACGCTCTT
GAAAAACGTGGGCTGTGAAGTGATCACGGCCATCGACGGATTCGATGCCCTGGCCAAGATCGCCGACAATCACCCCGGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGCTATCAAACCTGCGCATTAATCAAGAACAACCCGGCTTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGTATCGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATCCAGGCCCATGTTCCGGGCTTTGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709

Multiple sequence alignment