Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACM5XX_RS07615 Genome accession   NZ_CP183946
Coordinates   1428675..1429271 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain HKSSLJEBR3     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1423675..1434271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM5XX_RS07585 (ACM5XX_07585) - 1423889..1424344 (+) 456 WP_044053160.1 flavodoxin -
  ACM5XX_RS07590 (ACM5XX_07590) dapD 1424426..1425136 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACM5XX_RS07595 (ACM5XX_07595) - 1425207..1426331 (+) 1125 WP_014304923.1 N-acetyldiaminopimelate deacetylase -
  ACM5XX_RS07600 (ACM5XX_07600) - 1426392..1426637 (+) 246 WP_003154596.1 YkuS family protein -
  ACM5XX_RS07605 (ACM5XX_07605) - 1426671..1427477 (-) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  ACM5XX_RS07610 (ACM5XX_07610) - 1427765..1428223 (+) 459 WP_014304924.1 TlpA disulfide reductase family protein -
  ACM5XX_RS07615 (ACM5XX_07615) rok 1428675..1429271 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  ACM5XX_RS07620 (ACM5XX_07620) - 1429292..1430284 (-) 993 WP_014304925.1 hypothetical protein -
  ACM5XX_RS07625 (ACM5XX_07625) - 1430430..1431032 (+) 603 WP_003154587.1 molybdenum cofactor guanylyltransferase -
  ACM5XX_RS07630 (ACM5XX_07630) - 1431084..1432103 (+) 1020 WP_003154586.1 molybdopterin-synthase adenylyltransferase MoeB -
  ACM5XX_RS07635 (ACM5XX_07635) glp 1432121..1433413 (+) 1293 WP_014304926.1 gephyrin-like molybdotransferase Glp -
  ACM5XX_RS07640 (ACM5XX_07640) mobB 1433374..1433895 (+) 522 WP_041481858.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=1107230 ACM5XX_RS07615 WP_003154591.1 1428675..1429271(+) (rok) [Bacillus velezensis strain HKSSLJEBR3]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=1107230 ACM5XX_RS07615 WP_003154591.1 1428675..1429271(+) (rok) [Bacillus velezensis strain HKSSLJEBR3]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment