Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   ACLKM0_RS03650 Genome accession   NZ_CP183907
Coordinates   774295..778788 (+) Length   1497 a.a.
NCBI ID   WP_411688968.1    Uniprot ID   -
Organism   Acinetobacter indicus strain M3_NDM     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 769295..783788
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLKM0_RS03625 - 769789..770382 (-) 594 WP_171525083.1 hypothetical protein -
  ACLKM0_RS03630 pilG 770712..771095 (+) 384 WP_005179541.1 twitching motility response regulator PilG Regulator
  ACLKM0_RS03635 - 771112..771480 (+) 369 WP_005179539.1 response regulator -
  ACLKM0_RS03640 - 771484..772020 (+) 537 WP_005179538.1 chemotaxis protein CheW -
  ACLKM0_RS03645 - 772066..774138 (+) 2073 WP_160241098.1 methyl-accepting chemotaxis protein -
  ACLKM0_RS03650 chpA 774295..778788 (+) 4494 WP_411688968.1 Hpt domain-containing protein Regulator
  ACLKM0_RS03655 - 778785..779246 (+) 462 WP_075167114.1 hypothetical protein -
  ACLKM0_RS03660 dapE 779316..780449 (-) 1134 WP_411688969.1 succinyl-diaminopimelate desuccinylase -
  ACLKM0_RS03665 - 780578..780724 (-) 147 WP_005179532.1 entericidin A/B family lipoprotein -
  ACLKM0_RS03670 - 780825..781727 (-) 903 WP_411688970.1 DUF1853 family protein -
  ACLKM0_RS03675 - 781818..782207 (+) 390 WP_075167111.1 YbaN family protein -
  ACLKM0_RS03680 elsL 782204..782734 (+) 531 WP_104488696.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1497 a.a.        Molecular weight: 166810.14 Da        Isoelectric Point: 4.2849

>NTDB_id=1107121 ACLKM0_RS03650 WP_411688968.1 774295..778788(+) (chpA) [Acinetobacter indicus strain M3_NDM]
MKEILKNLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELKDLLAQWATQPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVISGSLTLSAQVQQFATAVANVFEYKLYPSFKHAQPMALDLRPLVLLGQQLQQNLSPEPALEELLQL
ASSLTSSDSITGLEFDTASTDEQVAADTELAVADSVEEDPLAAETLAIFIEEAEEHLLTVDRFLAHDELKTQDYNGLIRA
LHTLRGSSSMAHIEQIFDASSKVENLFKTLLQDEIESTSKETALLLQYAEFVRDYLHLLPQNDSAGMDRIYQTFNTAWQN
YGFSLEDVDESVNPQGLVSKLIELNIDQLLDAEFEFDQRAQAEYPEYIQTLSHQAKLLVERTDNRASQGIHDFTQELQLA
YAALLDKPSLLHSDYAFELFGQAHQEFIHLFDTLAAGQRVSLSEDAQQIINNLSAFVQQDIEALSPETDTTEAVTETVEA
GAGLNLAVLSQRLEADRQYMDSAEANKDFDPDLLDIFLEEAEELLTGIDQDVNSWSQDPSNTAALNNLMRHLHTLKGGAN
MIAASHIGLIAHHLETIYERIINRQMSASTALIQIIRLVQDNIADRIQTIREQQVDYPAQESLAILENISELAQGQLVEA
ESLAVTAEATSSADVQQSDASALEFELEPAPAETAYAAPEDEQQPDISSEPVLEDAPTLAEQSTPTDAVSTTENDGEDNL
HSIVEETFLEEAEELLDTTESLLKQWFDHRSDRSILLQLQRAAHSLKGGARMAEIEPVAVIAYQLENTFEQFAVHQFNSN
AYDALLNTTVAWLKEAIFQRDYSNFDSLKASLESIEYVNATAQLPERFNTADLLAPSKTFEFVQGDGAEPPSMQGEWSET
AQLDNSNEMIRISADLVEKMIDLSGENAINRSRIEMELGQLGGTLNEMELAIKRLADQLRRMEGELESQIIAKHGDEHSR
YTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLADKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIV
RQTSSTLNRPAELVVHNTEGELDRTILERLISPFEHMLRNAVDHGLEDAAVRKQAAKPEVGQIELNIGRQGTDVLISFTD
DGKGIDETKIHAKALSLGLIQPEQQLDKKEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVEVDSELGKGT
TFSIRVPTTVAVSDALMVKVGDQQFAIPLAQIDRIVRISPSALESYFSSKDDYFKIDQQNYKLRYLSEFVANQPLPRLSN
IAHSLPVLLIKGNTGQTIALLVDQLIGSRGQIVMKPIGQQFSSVGSIAGATILGDGQVCLILDGQNIARQIQATQRIKHV
MEPREVQRRDTRRLVMIVDDSVTVRKVTSRLLERQGFDVVTAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTNLVRH
HDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIENILHSSEAKA

Nucleotide


Download         Length: 4494 bp        

>NTDB_id=1107121 ACLKM0_RS03650 WP_411688968.1 774295..778788(+) (chpA) [Acinetobacter indicus strain M3_NDM]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGCTAAAAGACCTGTTGGCTCAATGGGCCACGCAGCCTAACG
ATCAGGAAACGCTAACCACCATTCGCCGTCATTTTCATACCTTAAAAGGTTCTGGACGCATGGTTGGTGCCAAGTCGGCA
GGAGAGCTGGCCTGGACGGTTGAAGATACCTTAAACCGGGTCATTTCCGGTAGCCTGACCCTGTCAGCGCAGGTGCAGCA
GTTTGCAACCGCGGTGGCGAACGTCTTTGAATACAAACTTTATCCAAGCTTTAAACATGCTCAGCCGATGGCACTAGACC
TGCGTCCATTGGTGCTATTAGGACAACAATTACAACAAAATTTAAGTCCTGAACCGGCTTTAGAAGAGCTGTTACAACTG
GCAAGCAGCCTAACATCCAGCGACAGTATCACCGGTCTGGAGTTTGATACAGCAAGTACTGATGAGCAGGTTGCTGCAGA
CACCGAGCTGGCTGTGGCTGATAGTGTTGAAGAAGATCCGCTAGCAGCTGAAACACTGGCCATCTTTATTGAAGAAGCGG
AAGAACACCTGTTAACAGTGGATCGCTTCCTGGCACATGATGAGCTGAAAACCCAAGATTACAATGGCCTGATTCGTGCC
CTGCATACCTTGCGCGGCAGTTCATCCATGGCACACATCGAGCAGATTTTTGATGCCAGCTCCAAGGTCGAAAACCTGTT
CAAGACCCTGTTGCAGGATGAAATTGAATCGACCTCTAAAGAAACCGCACTGTTGCTGCAATATGCTGAATTTGTGCGGG
ATTATCTGCATCTGTTGCCGCAGAATGACAGTGCCGGCATGGACCGGATTTATCAGACCTTCAATACTGCATGGCAGAAC
TACGGCTTTAGCCTGGAAGATGTTGATGAGTCAGTGAATCCGCAAGGTCTGGTATCCAAGCTGATTGAACTGAATATTGA
TCAGTTGCTCGATGCTGAGTTCGAATTTGACCAGCGTGCGCAGGCTGAATATCCGGAATATATCCAGACCCTGAGCCATC
AGGCGAAGCTGCTGGTAGAGCGTACCGATAACCGCGCCTCTCAGGGTATTCATGATTTTACCCAGGAATTACAACTGGCC
TATGCGGCCTTGCTGGACAAGCCAAGCCTACTGCATAGCGATTATGCCTTTGAATTATTTGGACAGGCGCATCAGGAATT
TATCCATCTGTTTGATACCCTGGCTGCCGGGCAACGCGTCAGCTTAAGCGAAGATGCTCAGCAGATCATCAATAACCTGA
GTGCCTTTGTACAGCAGGATATTGAAGCACTAAGCCCAGAAACTGATACCACAGAAGCTGTAACCGAAACGGTTGAAGCC
GGTGCCGGGCTGAATCTGGCCGTATTGTCACAGCGTCTGGAAGCTGACCGTCAATACATGGATAGCGCTGAAGCCAACAA
GGACTTTGATCCAGACCTGCTGGACATTTTCCTGGAAGAGGCCGAAGAGTTACTTACGGGTATTGACCAGGATGTTAACA
GCTGGAGCCAAGACCCGAGCAATACTGCTGCGCTGAACAATCTGATGCGCCATTTGCACACCTTAAAAGGTGGTGCCAAC
ATGATTGCAGCCAGCCATATCGGTCTGATTGCGCACCATTTAGAAACCATTTATGAGCGCATCATTAACCGTCAGATGAG
CGCATCGACCGCATTGATTCAGATTATCCGTCTGGTTCAGGACAATATTGCGGACCGTATCCAGACCATCCGTGAACAGC
AGGTCGATTATCCGGCGCAAGAATCACTGGCGATTCTGGAAAATATTAGCGAACTGGCCCAAGGTCAACTGGTTGAAGCT
GAATCGCTGGCAGTGACGGCTGAAGCAACCTCTAGCGCAGATGTACAACAGTCTGATGCATCTGCACTGGAATTTGAGTT
GGAACCAGCACCTGCAGAAACAGCCTATGCTGCGCCTGAAGATGAGCAGCAGCCAGATATTAGCAGCGAACCGGTACTGG
AAGATGCACCGACCCTGGCTGAGCAGAGCACCCCGACAGACGCGGTATCCACTACTGAAAATGACGGTGAAGACAATCTG
CATTCGATTGTGGAAGAAACCTTCCTGGAAGAAGCTGAAGAGCTGCTCGACACCACAGAAAGCCTGTTAAAGCAGTGGTT
TGACCATCGTAGTGACCGAAGCATTTTGCTGCAGTTACAACGTGCTGCGCACAGCCTGAAAGGCGGCGCGCGTATGGCCG
AAATCGAGCCGGTGGCCGTGATTGCCTATCAGCTGGAAAATACCTTTGAACAGTTCGCGGTGCATCAGTTTAATTCCAAT
GCCTATGATGCCTTGCTCAACACCACTGTGGCTTGGTTAAAAGAAGCCATCTTCCAGCGCGATTACAGCAATTTTGATAG
CCTGAAAGCCAGCCTGGAGTCGATTGAATACGTCAATGCGACGGCGCAGCTGCCAGAACGCTTCAATACCGCCGATCTGC
TGGCGCCAAGCAAAACCTTCGAATTTGTGCAGGGTGATGGTGCCGAGCCGCCATCCATGCAGGGCGAATGGAGCGAAACC
GCACAGCTGGATAACAGCAATGAGATGATCCGTATTTCGGCTGATCTGGTTGAGAAGATGATTGACCTGTCGGGTGAAAA
CGCGATTAACCGCTCGCGAATCGAGATGGAGCTGGGTCAGCTGGGCGGTACCCTGAATGAAATGGAACTGGCGATTAAAC
GTCTGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAAGCCAGATTATTGCCAAACATGGTGATGAACATTCACGC
TATACCGACTTCGACCCGCTGGAGATGGACCAGTACTCCTCCTTGAACCAGCTGTCGAAATCGTTGGCGGAATCGGCGTC
GGACTTGGTGGACTTTAAGACCACGCTGGCGGACAAGATTCGTGATGCCGAAGGTCTGTTACTGCAACAATCGCGGATTC
AGGCAGAAATTCAGGAAAGCCTGATGCGTACCCGTCTGGTACCGTTCTCGCGCATGTTGCCACGTTTACAGCGGATTGTG
CGTCAGACTTCATCGACCTTAAACCGTCCTGCTGAGCTGGTGGTACACAATACCGAAGGCGAGCTGGACCGGACCATTCT
GGAACGCCTGATTTCACCATTTGAACACATGCTGCGTAATGCGGTGGACCATGGCCTGGAAGATGCCGCTGTACGTAAAC
AGGCAGCGAAGCCGGAAGTGGGCCAGATTGAGCTGAACATTGGCCGTCAGGGCACTGATGTACTGATTAGCTTTACCGAT
GATGGTAAGGGGATTGATGAAACCAAAATTCACGCCAAAGCCCTGAGCCTTGGCCTGATTCAGCCAGAGCAGCAGCTGGA
CAAGAAAGAAATCCTGCAGCTGATTTTCCATCCGGGCTTTAGTACCGCACAAGCCGTGACCCAAATTTCAGGTCGTGGCG
TCGGTCTGGACGTGGTGCAAAGCGAAATTAAAGCGCTGGGCGGCCATGTCGAGGTCGATTCTGAACTCGGTAAAGGCACT
ACTTTCAGTATTCGCGTACCGACCACAGTGGCGGTATCCGATGCCCTGATGGTAAAAGTTGGCGATCAGCAGTTCGCAAT
TCCATTGGCGCAAATTGACCGTATTGTACGAATTTCACCTTCTGCACTGGAAAGTTACTTCAGCAGCAAAGATGATTACT
TCAAGATTGATCAGCAAAACTATAAGTTGCGCTATCTGTCCGAGTTTGTTGCCAATCAGCCATTACCACGGTTAAGCAAT
ATCGCGCATTCATTGCCGGTGCTGCTGATTAAAGGCAATACTGGTCAGACCATTGCCTTACTGGTCGATCAGCTGATTGG
TTCGCGTGGCCAGATTGTGATGAAACCGATTGGGCAGCAGTTCTCCAGCGTGGGCTCGATTGCCGGCGCGACCATTCTCG
GTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGATTCAGGCCACCCAGCGCATCAAGCATGTG
ATGGAGCCGCGTGAAGTACAGCGTCGTGATACCCGTCGTCTGGTGATGATTGTGGATGACTCGGTGACCGTACGTAAGGT
CACGTCACGTCTGCTCGAACGTCAGGGCTTTGATGTGGTCACGGCCAAAGACGGTGTCGATGCGATTGAGCAGCTGGAAA
ATGTTAAACCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGATGGCTTTGAGGTGACCAACCTGGTACGCCAC
CATGACATCCATCGTGACTTGCCAATTATCATGATTACCTCGCGTACCGGTGAAAAACACCGCGAACGTGCCTTTAGCTT
GGGGGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCAGAATTGCTTGCCAATATTGAAAACATTTTGCATAGCAGTG
AGGCTAAAGCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.407

100

0.624


Multiple sequence alignment