Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   ACLKM3_RS11975 Genome accession   NZ_CP183897
Coordinates   2466141..2468363 (+) Length   740 a.a.
NCBI ID   WP_019836050.1    Uniprot ID   -
Organism   Acinetobacter towneri strain M10_NDM     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2461141..2473363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLKM3_RS11950 tusA 2461302..2461559 (-) 258 WP_019836046.1 sulfurtransferase TusA -
  ACLKM3_RS11955 - 2461758..2462597 (+) 840 WP_019836047.1 CBS domain-containing protein -
  ACLKM3_RS11960 lnt 2462594..2464150 (+) 1557 WP_411690645.1 apolipoprotein N-acyltransferase -
  ACLKM3_RS11965 gspG 2464273..2464707 (-) 435 WP_019836048.1 type II secretion system major pseudopilin GspG -
  ACLKM3_RS11970 gspF 2464784..2465989 (-) 1206 WP_019836049.1 type II secretion system inner membrane protein GspF -
  ACLKM3_RS11975 priA 2466141..2468363 (+) 2223 WP_019836050.1 primosomal protein N' Machinery gene
  ACLKM3_RS11980 - 2468436..2470277 (+) 1842 WP_019836051.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  ACLKM3_RS11985 hslO 2470328..2471203 (+) 876 WP_019836052.1 Hsp33 family molecular chaperone HslO -
  ACLKM3_RS11990 - 2471463..2471927 (+) 465 WP_019836053.1 DUF2147 domain-containing protein -
  ACLKM3_RS11995 - 2472178..2472639 (+) 462 WP_019836054.1 DUF2147 domain-containing protein -
  ACLKM3_RS12000 - 2473022..2473357 (+) 336 WP_026437978.1 chaperone modulator CbpM -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83827.16 Da        Isoelectric Point: 9.0101

>NTDB_id=1107020 ACLKM3_RS11975 WP_019836050.1 2466141..2468363(+) (priA) [Acinetobacter towneri strain M10_NDM]
MPDSTLAPQPVYRIRVAVPVYLYDCFDYMLSAVQYQQAEVGARVLVSFGRQNLVGIIVEKLALDTPIDPRFKLKAISELL
DEQAILDPKVLTLLTWSAQYYQFPIGEVMQSALPSLLRQAKPYNLLARTWKLLDAHAEAKITRSEKQQEAYKILKLHPSG
TSENILNMAGIETATLKALANKEICACVLEAQDFSPMPVTLAQMPLTPNPDQKKAIDSVLKVRQQYKAFLLDGLTGSGKT
EVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCNIALLHSGLNDSKRLQAWQAAQTGKASIILGTRSAIYTPL
SNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPVILGSATPSIDSYALVDQGKMQCLELNQRAGTALMPKIHL
IDLKIAKKQYGISQQLIDEIKKRLAKKEQVLVFLNRRGYAPVLICESCAWQAKCPNCDANFTLHHQPYTHLHCHHCGTIH
RKPEQCPACKHTELKPIGMGTAKVEDSLNELFPNVDVIRVDRDSTSRVGSWQKIYDRIQRSEPLILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGDVYLQSVRPDHPLLTTLVKGDYRKFAQQSLKERKAAQL
PPYRYSALIRCESKSQELNQHFLQQHAQWLREHSEQLIEIWGPIPAPMERKAGRFHAHMVLLSKDRARLHFYIRNWWQNM
LHEKPSSMKLSLDIDPQEFS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=1107020 ACLKM3_RS11975 WP_019836050.1 2466141..2468363(+) (priA) [Acinetobacter towneri strain M10_NDM]
ATGCCAGATTCCACTTTAGCCCCACAGCCTGTTTATCGTATTCGAGTGGCTGTGCCTGTGTATCTTTACGACTGCTTCGA
TTATATGCTCAGTGCAGTTCAATATCAGCAAGCAGAAGTGGGCGCGCGGGTCTTGGTTTCTTTTGGTCGGCAAAACTTGG
TCGGGATTATTGTCGAAAAACTGGCACTCGATACTCCAATTGATCCACGTTTTAAACTCAAAGCCATTAGCGAACTGTTA
GATGAGCAAGCGATTTTAGACCCTAAAGTTTTAACTTTGTTGACATGGTCGGCACAATATTATCAATTCCCGATTGGTGA
GGTGATGCAAAGCGCCTTGCCTAGTTTATTGCGCCAAGCCAAACCCTATAACTTATTAGCACGTACTTGGAAATTGTTGG
ATGCACATGCCGAAGCCAAAATTACACGTTCGGAAAAACAGCAAGAAGCCTATAAAATTTTAAAGCTGCACCCTTCGGGC
ACTTCTGAAAATATTTTAAATATGGCTGGCATTGAAACGGCAACCCTAAAAGCCTTAGCGAATAAAGAAATTTGCGCATG
TGTTTTGGAAGCCCAAGATTTTAGTCCGATGCCCGTGACTTTGGCGCAAATGCCTTTAACCCCTAATCCAGATCAAAAAA
AAGCCATCGACAGCGTACTTAAAGTACGACAGCAATATAAGGCATTTTTGCTAGATGGTTTAACGGGCAGCGGCAAAACT
GAAGTGTACTTACACATCATGCATGAGGTGCTGAAACAGGGCAAACAAGTATTGGTGTTAGTGCCTGAAATTGGTCTAAC
ACCACAAACCATTAGCCGTTTCCAGTCACGTTTTCATTGCAACATTGCGCTCTTGCACTCAGGTTTAAATGATTCCAAGC
GTTTGCAGGCATGGCAAGCCGCACAAACGGGTAAAGCCTCAATTATTTTAGGTACACGCTCAGCCATTTATACCCCATTG
TCAAATTTAGGCTTGATTATTTTGGATGAAGAACATGACCTGTCTTTTAAACAGCAGGAAGGTTTTCGCTACCATGCCCG
TGATGTTGCGCTCTATCGTGCCCATCTGGAAAATTGCCCTGTTATTTTAGGTTCGGCGACTCCAAGCATTGACAGCTATG
CACTAGTCGATCAAGGTAAAATGCAATGTCTGGAGTTAAATCAACGTGCGGGCACGGCACTCATGCCCAAAATCCACTTG
ATTGATTTAAAAATTGCAAAAAAACAGTACGGTATTAGCCAACAATTGATTGATGAAATCAAAAAACGATTGGCTAAAAA
AGAACAAGTTTTGGTGTTTTTAAACCGACGCGGCTATGCGCCCGTATTGATTTGTGAGAGCTGTGCATGGCAAGCCAAAT
GCCCGAATTGTGATGCCAACTTTACATTGCATCATCAACCTTATACGCATTTACATTGCCACCACTGCGGTACGATTCAT
CGTAAACCTGAGCAATGCCCTGCCTGTAAGCATACAGAACTCAAACCAATTGGCATGGGCACTGCCAAAGTTGAAGACAG
TTTAAATGAGCTGTTCCCCAATGTAGATGTGATTCGGGTAGATCGGGACTCGACCAGCCGAGTAGGAAGTTGGCAAAAAA
TTTATGACCGCATCCAACGCAGTGAACCGCTAATTTTATTGGGCACGCAAATGCTGGCCAAAGGGCATCATTTTCCGTAT
GTGACCTTGGTGGCAATTTTAGATATTGATTCAGGCTTACTTAGTGTGGATATTCGCGCACCTGAACGCACAGCTCAACT
GATTGTGCAAGTGGCGGGACGTGCAGGGCGTGGTGAGCATAAAGGTGATGTTTATTTGCAAAGTGTGCGTCCTGACCATC
CACTTCTCACCACGTTGGTCAAGGGAGATTACCGCAAGTTTGCCCAACAAAGTTTAAAAGAACGCAAAGCTGCACAATTA
CCACCCTATCGTTACAGTGCTTTGATTCGTTGTGAATCTAAAAGTCAGGAATTAAACCAGCATTTTTTACAACAACATGC
ACAATGGCTTAGAGAACATTCAGAACAATTAATTGAAATTTGGGGGCCGATTCCTGCGCCAATGGAGCGTAAAGCAGGAC
GTTTCCATGCACATATGGTGTTGTTGTCTAAAGATCGGGCACGCTTACATTTTTATATCAGGAACTGGTGGCAAAATATG
TTGCATGAAAAGCCATCCAGCATGAAACTAAGTTTAGATATAGATCCGCAAGAATTTAGCTAA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

Type III restriction enzyme, res subunit (ResIII)

(207-369)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

72.74

100

0.728

Multiple sequence alignment