Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   ACLKM5_RS10355 Genome accession   NZ_CP183893
Coordinates   2161253..2165746 (-) Length   1497 a.a.
NCBI ID   WP_411687517.1    Uniprot ID   -
Organism   Acinetobacter indicus strain D10_NDM_tet(X3)     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2156253..2170746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLKM5_RS10325 elsL 2157308..2157838 (-) 531 WP_104488696.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  ACLKM5_RS10330 - 2157835..2158224 (-) 390 WP_411687515.1 YbaN family protein -
  ACLKM5_RS10335 - 2158315..2159205 (+) 891 WP_411687516.1 DUF1853 family protein -
  ACLKM5_RS10340 - 2159317..2159463 (+) 147 WP_005179532.1 entericidin A/B family lipoprotein -
  ACLKM5_RS10345 dapE 2159592..2160725 (+) 1134 WP_104488695.1 succinyl-diaminopimelate desuccinylase -
  ACLKM5_RS10350 - 2160795..2161256 (-) 462 WP_075167114.1 hypothetical protein -
  ACLKM5_RS10355 chpA 2161253..2165746 (-) 4494 WP_411687517.1 Hpt domain-containing protein Regulator
  ACLKM5_RS10360 - 2165903..2167975 (-) 2073 WP_087662228.1 methyl-accepting chemotaxis protein -
  ACLKM5_RS10365 - 2168021..2168557 (-) 537 WP_005179538.1 chemotaxis protein CheW -
  ACLKM5_RS10370 - 2168561..2168929 (-) 369 WP_005179539.1 response regulator -
  ACLKM5_RS10375 pilG 2168946..2169329 (-) 384 WP_005179541.1 twitching motility response regulator PilG Regulator
  ACLKM5_RS10380 - 2169659..2170252 (+) 594 WP_171525083.1 hypothetical protein -

Sequence

Protein


Download         Length: 1497 a.a.        Molecular weight: 166838.20 Da        Isoelectric Point: 4.2984

>NTDB_id=1106936 ACLKM5_RS10355 WP_411687517.1 2161253..2165746(-) (chpA) [Acinetobacter indicus strain D10_NDM_tet(X3)]
MKEILKNLVETTALPEDSYLDQDAEILEIFVEEIEEIFVELKDLLAQWATQPNDQETLTTIRRHFHTLKGSGRMVGAKSA
GELAWTVEDTLNRVISGSLTLSAQVQQFATAVANVFEYKLYPSFKHAQPMALDLRPLVLLGQQLQQNLSPEPALEELLQL
ASSLRSSDSITGLEFDTASTDEQVAADTELAVADSVEEDPLAAETLAIFIEEAEEHLLTVDRFLAHDELKTQDYNGLIRA
LHTLRGSSSMAHIEQIFDASSKVENLFKTLLQDEIESTSKETALLLQYAEFVRDYLHLLPQNDSAGMDRIYQTFNTAWQN
YGFSLEDVDESVNPQGLVSKLIELNIDQLLDAEFEFDQRAQAEYPEYIQTLSHQAKLLVERTDNRASQGIHDFTQELQLA
YAALLDKPSLLHSDYAFELFGQAHQEFIHLFDTLAAGQRVSLSEDAQQIINNLSAFVQQDIEALSSETGTTEAVTETVEA
GAGLNLAVLSQRLEADRQYMDSAEANKDFDPDLLDIFLEEAEELLTGIDQDVNSWSQDPSNTAALNNLMRHLHTLKGGAN
MIAASHIGLIAHHLETIYERIINRQMNASTALIQIIRLVQDNIADRIQTIREQQVDYPAQESLAILENISELAQGQLVEA
ESLAVAAEATSSADVQQSDASALEFELEQPAPAETAYTAPEDEQPDTSSEPVLEDAPTLAEQTIPTDAVSTTENDGEDNL
HSIVEETFLEEAEELLDTTESLLKQWFDHRSDRSILLQLQRAAHSLKGGARMAEIEPVAVIAYQLENTFEQFAVHQFNSN
AYDALLNTTVAWLKEAIFQRDYSNFDSLKASLESIEYVNATAQLPERFNATDLLAPSKTFEFVQGDGAEPPSMQGEWSET
AQLDNSNEMIRISADLVEKMIDLSGENAINRSRIEMELGQLGGTLNEMELAIKRLADQLRRMEGELESQIIAKHGDEHSR
YTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLADKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIV
RQTSSTLNRPAELVVHNTEGELDRTILERLISPFEHMLRNAVDHGLEDAAVRKQAAKPEVGQIELNIGRQGTDVLISFTD
DGKGIDETKIHAKALSLGLIQPEQQLDKKEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVEVDSELGKGT
TFSIRVPTTVAVSDALMVKVGDQQFAIPLAQIDRIVRISPSALESYFSSKDDYFKIDQQNYKLRYLSEFVANQPLPRLSN
IAHSLPVLLIKGNTGQTIALLVDQLIGSRGQIVMKPIGQQFSSVGSIAGATILGDGQVCLILDGQNIARQIQATQRIKHV
MEPREVQRRDTRRLVMIVDDSVTVRKVTSRLLERQGFDVVTAKDGVDAIEQLENVKPDLMLLDIEMPRMDGFEVTNLVRH
HDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIENILHSSEAKA

Nucleotide


Download         Length: 4494 bp        

>NTDB_id=1106936 ACLKM5_RS10355 WP_411687517.1 2161253..2165746(-) (chpA) [Acinetobacter indicus strain D10_NDM_tet(X3)]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACTGCGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTCT
AGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGAGCTAAAAGACCTGTTGGCTCAATGGGCCACGCAGCCTAACG
ATCAGGAAACGCTAACCACCATTCGCCGTCATTTTCATACCTTAAAAGGTTCGGGACGTATGGTTGGGGCCAAGTCGGCA
GGGGAGCTGGCCTGGACGGTTGAAGATACCTTAAACCGGGTCATTTCCGGTAGCCTGACCCTGTCAGCGCAGGTGCAGCA
GTTTGCAACCGCGGTGGCGAACGTCTTTGAATACAAACTTTATCCAAGCTTTAAACATGCTCAGCCGATGGCACTAGACC
TGCGTCCATTGGTGCTATTAGGACAACAATTACAACAAAATTTAAGTCCTGAACCGGCTTTAGAAGAGCTGTTACAACTG
GCAAGCAGCCTAAGGTCCAGCGACAGTATCACCGGTCTGGAGTTTGATACAGCAAGTACTGATGAGCAGGTTGCTGCAGA
CACCGAGCTGGCTGTGGCTGATAGTGTTGAAGAAGATCCGCTAGCAGCTGAAACACTGGCCATCTTTATTGAAGAAGCGG
AAGAACACCTGTTAACGGTGGATCGCTTCCTGGCACACGATGAGCTGAAAACCCAAGATTACAATGGCCTGATTCGTGCC
CTGCATACCTTGCGCGGCAGTTCATCCATGGCACACATCGAGCAGATTTTTGATGCCAGCTCCAAGGTCGAAAACCTGTT
CAAGACCCTGTTGCAGGATGAAATTGAATCGACCTCTAAAGAAACCGCACTGTTGCTGCAATATGCTGAATTTGTGCGGG
ATTATCTGCATCTGTTGCCGCAGAATGACAGTGCCGGCATGGACCGGATTTATCAGACCTTCAATACTGCATGGCAGAAC
TACGGCTTTAGCCTGGAAGATGTTGATGAGTCAGTGAATCCGCAAGGTCTGGTATCCAAGCTGATTGAACTGAATATTGA
TCAGTTGCTCGATGCTGAGTTCGAATTTGACCAGCGTGCGCAGGCTGAATATCCGGAATATATCCAGACCCTGAGCCATC
AGGCGAAGCTGCTGGTAGAGCGTACCGATAACCGCGCCTCTCAGGGTATTCATGATTTTACCCAGGAATTACAACTGGCC
TATGCGGCCTTGCTGGACAAGCCAAGCCTGCTGCATAGCGATTATGCCTTTGAATTATTTGGACAGGCGCATCAGGAATT
TATCCATCTGTTTGATACCCTGGCTGCCGGGCAACGCGTCAGCTTAAGCGAAGATGCCCAGCAGATCATCAATAACCTGA
GTGCCTTTGTACAGCAGGATATTGAAGCGCTAAGCTCAGAAACTGGCACCACAGAAGCTGTCACCGAAACGGTTGAAGCC
GGTGCCGGGCTGAATCTGGCCGTATTGTCACAGCGTCTGGAAGCTGACCGTCAATACATGGATAGCGCTGAAGCCAACAA
GGACTTTGATCCAGACCTGCTGGACATTTTCCTGGAAGAGGCCGAAGAGTTACTTACGGGTATTGACCAGGATGTTAACA
GCTGGAGCCAAGACCCGAGCAATACTGCTGCGCTGAACAATCTGATGCGCCATTTGCACACCTTAAAAGGTGGTGCCAAC
ATGATTGCAGCCAGCCATATCGGTCTGATTGCGCACCATTTAGAAACCATTTATGAGCGCATCATTAACCGTCAAATGAA
TGCATCAACCGCATTGATCCAGATTATCCGTCTGGTTCAGGACAATATTGCGGACCGTATCCAGACCATCCGTGAACAGC
AGGTCGATTATCCGGCGCAAGAATCACTGGCGATTCTGGAAAATATTAGCGAACTGGCCCAAGGTCAACTGGTTGAAGCT
GAATCGCTGGCAGTGGCGGCTGAAGCAACCTCTAGCGCAGATGTACAACAGTCTGATGCATCTGCACTTGAGTTTGAACT
GGAACAGCCAGCACCTGCAGAAACAGCCTATACTGCGCCTGAAGATGAGCAGCCAGACACCAGCAGCGAACCGGTACTGG
AAGATGCACCGACCCTGGCTGAGCAAACCATCCCTACAGATGCGGTATCTACTACTGAAAATGACGGTGAAGACAATCTG
CATTCGATTGTGGAAGAAACCTTCCTGGAAGAAGCTGAAGAGCTGCTCGACACCACAGAAAGCCTGTTAAAGCAGTGGTT
TGACCATCGTAGTGATCGAAGCATTTTGCTGCAGTTACAACGTGCTGCGCACAGCCTGAAAGGCGGCGCGCGTATGGCCG
AAATCGAGCCGGTGGCCGTGATTGCCTATCAGCTGGAAAATACCTTTGAACAGTTCGCGGTGCATCAGTTTAATTCCAAT
GCCTATGATGCCTTGCTCAACACCACTGTGGCTTGGTTAAAAGAAGCCATCTTCCAGCGCGATTACAGCAATTTTGATAG
CCTGAAAGCCAGCCTGGAGTCGATTGAATACGTCAATGCGACGGCGCAGCTGCCAGAACGCTTTAATGCTACCGATTTGC
TGGCACCAAGCAAAACCTTCGAATTTGTGCAGGGTGATGGTGCCGAGCCGCCATCCATGCAGGGCGAATGGAGCGAAACC
GCACAGCTGGATAACAGCAATGAGATGATCCGTATTTCGGCTGATCTGGTTGAGAAGATGATTGACCTGTCGGGTGAAAA
CGCGATTAACCGCTCGCGAATCGAGATGGAGCTGGGTCAGCTGGGCGGTACCCTGAATGAAATGGAACTGGCGATTAAAC
GTCTGGCCGATCAGTTACGCCGAATGGAAGGCGAGCTGGAAAGCCAGATTATTGCCAAACATGGTGATGAACATTCACGC
TATACCGACTTCGACCCGCTGGAGATGGACCAGTACTCCTCCTTGAACCAGCTGTCAAAATCGTTGGCGGAATCGGCGTC
GGACTTGGTGGACTTTAAGACCACGCTGGCGGACAAGATTCGTGATGCCGAAGGTCTGTTACTGCAACAGTCGCGGATTC
AGGCAGAAATTCAGGAAAGCCTGATGCGTACCCGTCTGGTACCGTTCTCGCGCATGTTGCCACGTTTACAGCGGATTGTG
CGTCAGACTTCATCGACCTTAAACCGTCCTGCCGAGCTGGTGGTACACAATACCGAAGGCGAGCTGGACCGGACCATTCT
GGAACGCCTGATTTCACCATTTGAACACATGCTGCGTAATGCGGTGGACCATGGTCTTGAAGATGCCGCTGTACGTAAAC
AGGCAGCGAAGCCGGAAGTGGGCCAGATTGAGCTGAACATCGGCCGTCAGGGTACCGATGTACTGATTAGCTTTACCGAT
GATGGTAAGGGGATTGATGAAACCAAAATTCACGCCAAGGCCCTGAGCCTTGGCCTGATTCAGCCAGAGCAGCAGCTGGA
CAAGAAAGAAATTCTGCAGCTGATTTTCCATCCGGGCTTTAGTACCGCACAAGCCGTGACCCAGATTTCAGGTCGTGGCG
TCGGTCTGGACGTGGTGCAAAGCGAAATTAAAGCGCTAGGTGGCCATGTCGAGGTCGATTCTGAACTCGGTAAAGGCACT
ACTTTCAGTATTCGCGTACCGACCACAGTGGCGGTATCCGATGCCTTGATGGTAAAAGTTGGCGATCAGCAGTTCGCAAT
TCCATTGGCGCAAATTGACCGTATTGTACGAATTTCACCTTCTGCGCTGGAAAGTTACTTCAGCAGCAAAGATGACTACT
TCAAGATTGATCAGCAAAACTATAAGTTGCGCTATCTGTCCGAGTTTGTTGCCAATCAGCCATTACCACGGTTAAGCAAT
ATCGCGCATTCATTGCCGGTGCTGCTGATTAAAGGCAATACTGGTCAGACCATTGCCTTACTGGTCGATCAGCTGATTGG
TTCACGTGGCCAGATTGTGATGAAACCGATTGGGCAGCAGTTCTCCAGCGTGGGTTCGATTGCCGGCGCGACCATTCTCG
GTGATGGTCAGGTCTGTCTGATTCTGGATGGTCAGAATATTGCCCGTCAGATTCAGGCCACCCAGCGCATCAAGCATGTG
ATGGAGCCGCGTGAAGTACAGCGTCGTGATACCCGTCGTCTGGTGATGATTGTGGATGACTCGGTGACCGTACGTAAGGT
CACGTCACGTCTGCTCGAACGTCAGGGCTTTGATGTGGTCACGGCCAAAGACGGTGTCGATGCGATTGAGCAGCTGGAAA
ATGTTAAACCGGATCTGATGCTGCTGGATATTGAAATGCCGCGTATGGATGGCTTTGAGGTGACCAACCTGGTACGCCAC
CATGACATCCATCGTGACTTGCCAATTATCATGATTACCTCGCGTACCGGTGAAAAACACCGCGAACGTGCCTTTAGCTT
GGGGGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCAGAATTGCTTGCCAATATTGAAAACATTTTGCATAGCAGTG
AGGCTAAAGCATGA

Domains

Predicted by InterproScan.

CheW-like domain (CheW)

(1215-1350)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1073-1208)

Response regulator receiver domain (Response_reg)

(1375-1486)

Hpt domain (Hpt)

(726-790)

Hpt domain (Hpt)

(25-110)

Hpt domain (Hpt)

(204-284)

Hpt domain (Hpt)

(512-598)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.904

100

0.621

Multiple sequence alignment