Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACN6MR_RS01835 Genome accession   NZ_CP183888
Coordinates   348917..349873 (+) Length   318 a.a.
NCBI ID   WP_069686059.1    Uniprot ID   A0A1E5JYT1
Organism   Oceanobacillus kimchii strain PTI6     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 343917..354873
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN6MR_RS01815 (ACN6MR_01815) - 345197..346021 (+) 825 WP_419893383.1 aldo/keto reductase -
  ACN6MR_RS01820 (ACN6MR_01820) - 346122..346670 (-) 549 WP_069686060.1 HD domain-containing protein -
  ACN6MR_RS01825 (ACN6MR_01825) fni 347045..348094 (+) 1050 WP_017795618.1 type 2 isopentenyl-diphosphate Delta-isomerase -
  ACN6MR_RS01830 (ACN6MR_01830) - 348215..348673 (+) 459 WP_017795619.1 DUF2188 domain-containing protein -
  ACN6MR_RS01835 (ACN6MR_01835) ceuB 348917..349873 (+) 957 WP_069686059.1 ABC transporter permease Machinery gene
  ACN6MR_RS01840 (ACN6MR_01840) - 349860..350816 (+) 957 WP_017795621.1 iron chelate uptake ABC transporter family permease subunit -
  ACN6MR_RS01845 (ACN6MR_01845) - 350813..351589 (+) 777 WP_017795622.1 ABC transporter ATP-binding protein -
  ACN6MR_RS01850 (ACN6MR_01850) - 351824..352849 (+) 1026 WP_017795623.1 siderophore ABC transporter substrate-binding protein -
  ACN6MR_RS01855 (ACN6MR_01855) - 353019..353732 (+) 714 WP_317957711.1 DsbA family oxidoreductase -
  ACN6MR_RS01860 (ACN6MR_01860) - 353912..354631 (+) 720 WP_317957712.1 SurA N-terminal domain-containing protein -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34861.00 Da        Isoelectric Point: 9.7352

>NTDB_id=1106833 ACN6MR_RS01835 WP_069686059.1 348917..349873(+) (ceuB) [Oceanobacillus kimchii strain PTI6]
MKLWILIIFTVILSFVSLFIGAIDIKVTDLLDWESDKTQTFLISRVPRLMAIILAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDAAKLGILISMLFFTNVTYTQQVVFSFAFALIGTFVFMQILDRIKFKDAIFVPLIGIMYGNILSSITTFFAYEADLL
QNISSWLMGSFTLVIAGRYELLYVSVPAVILAYIYANKFTVAGMGEEFAKNLGLSYKVVLNIGLVLVAIISTTVVLTVGV
IPFLGLIVPNIVSLYLGDNLRKTIPHTAVMGIAFLLVCDIIGRIVVHPFEIPVNVTVAVIGSAIFLIMLFRGRAYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=1106833 ACN6MR_RS01835 WP_069686059.1 348917..349873(+) (ceuB) [Oceanobacillus kimchii strain PTI6]
ATGAAGTTATGGATATTAATTATTTTTACTGTAATCTTATCATTTGTCTCTCTTTTCATAGGAGCAATTGATATTAAGGT
AACGGATTTACTAGATTGGGAGTCTGATAAGACCCAAACATTTCTCATCAGTCGAGTACCTCGTTTAATGGCAATTATAT
TGGCAGGAGCTGGAATGAGTATTGCCGGTTTAATTATGCAATCACTTAGCAGAAATAAATTTGTTTCACCAACTACTGCT
GGTACATTAGATGCAGCTAAGCTCGGAATTTTGATATCCATGTTGTTTTTTACAAATGTTACATATACACAACAAGTGGT
CTTTAGTTTCGCGTTTGCATTAATTGGAACTTTCGTCTTTATGCAAATTTTAGATCGTATTAAATTTAAAGACGCAATAT
TTGTTCCGTTAATTGGTATCATGTATGGGAATATTTTATCTTCTATAACAACGTTTTTTGCATATGAGGCAGACCTTCTC
CAAAATATATCATCTTGGTTAATGGGGAGCTTTACATTAGTAATTGCTGGTCGATATGAATTGTTATATGTGAGCGTTCC
AGCTGTCATATTAGCATATATATACGCTAATAAATTTACAGTAGCAGGTATGGGTGAAGAATTCGCAAAAAATCTAGGAT
TGAGTTATAAAGTTGTACTGAATATCGGGCTTGTACTTGTAGCTATTATCTCAACAACTGTTGTACTTACTGTTGGAGTT
ATACCGTTTTTAGGGTTAATTGTTCCAAATATTGTTTCTCTATATTTAGGAGATAACTTACGTAAAACGATTCCACATAC
AGCGGTAATGGGAATTGCGTTCTTACTAGTATGCGATATTATTGGGCGTATTGTGGTACATCCGTTTGAGATCCCTGTGA
ACGTAACTGTAGCAGTTATTGGTAGTGCGATCTTCTTAATTATGTTGTTTAGGGGGAGAGCATATGCGAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1E5JYT1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.371

0.535

Multiple sequence alignment