Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACN6MU_RS17690 Genome accession   NZ_CP183885
Coordinates   3432186..3433142 (+) Length   318 a.a.
NCBI ID   WP_093537503.1    Uniprot ID   -
Organism   Psychrobacillus psychrotolerans strain BC2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3427186..3438142
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN6MU_RS17675 (ACN6MU_17675) - 3427406..3429124 (-) 1719 WP_419957829.1 ABC transporter ATP-binding protein -
  ACN6MU_RS17680 (ACN6MU_17680) - 3429449..3430936 (+) 1488 WP_340763742.1 peptide MFS transporter -
  ACN6MU_RS17685 (ACN6MU_17685) - 3431012..3431857 (+) 846 WP_340770618.1 DUF6612 family protein -
  ACN6MU_RS17690 (ACN6MU_17690) ceuB 3432186..3433142 (+) 957 WP_093537503.1 ABC transporter permease Machinery gene
  ACN6MU_RS17695 (ACN6MU_17695) - 3433129..3434085 (+) 957 WP_093537504.1 iron chelate uptake ABC transporter family permease subunit -
  ACN6MU_RS17700 (ACN6MU_17700) - 3434082..3434849 (+) 768 WP_093537505.1 ABC transporter ATP-binding protein -
  ACN6MU_RS17705 (ACN6MU_17705) - 3434971..3436008 (+) 1038 WP_340763734.1 siderophore ABC transporter substrate-binding protein -
  ACN6MU_RS17710 (ACN6MU_17710) - 3436315..3436926 (+) 612 WP_340763732.1 phosphatase PAP2 family protein -
  ACN6MU_RS17715 (ACN6MU_17715) - 3436972..3437622 (+) 651 WP_340763731.1 uracil-DNA glycosylase -
  ACN6MU_RS17720 (ACN6MU_17720) - 3437714..3438070 (+) 357 WP_419957830.1 hypothetical protein -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34830.02 Da        Isoelectric Point: 9.7261

>NTDB_id=1106778 ACN6MU_RS17690 WP_093537503.1 3432186..3433142(+) (ceuB) [Psychrobacillus psychrotolerans strain BC2]
MRLWMLIVTVIILSVISLFIGAIDIKPSHLLNWESLETQIFLISRLPRLLAIILAGAGMGIAGLIMQSLSRNKFVSPTTA
GTLDAAKLGIIISMIFFTGLSYIGQILFSFAFALIGTFIFMQLLERIKFKDAVFVPLIGIMYGNVIGALSTFLAYEANIL
QNVDAFFQGSFTLVVSGRYELLYVAVPAIIIAYIYANKFTVAGMGEDFAKNLGLSYRTVLNIGLIIVAIITTTVILTVGV
IPFLGLIVPNLVSLYLGDNLRKTIPHTIFMGAAFLLFCDIISRLIVHPYEIPVNTTVAVIGSVIFLIMLFRGKAYAQK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=1106778 ACN6MU_RS17690 WP_093537503.1 3432186..3433142(+) (ceuB) [Psychrobacillus psychrotolerans strain BC2]
ATGAGACTGTGGATGTTGATAGTTACAGTGATCATCCTGTCAGTTATTTCGCTATTTATTGGTGCGATTGACATAAAACC
GAGTCATTTGCTTAATTGGGAATCGTTAGAGACACAGATTTTCTTAATAAGTCGTTTACCAAGATTATTAGCTATAATTT
TAGCTGGCGCAGGGATGGGTATTGCAGGTTTAATCATGCAAAGTTTAAGTCGAAATAAATTTGTGTCGCCAACAACGGCT
GGTACATTAGATGCAGCAAAATTAGGGATTATCATATCAATGATATTCTTTACAGGTTTATCTTATATTGGACAAATCCT
TTTTAGTTTTGCTTTTGCTTTAATTGGTACATTTATCTTTATGCAACTACTTGAGCGTATTAAGTTCAAAGATGCCGTGT
TTGTTCCACTTATCGGGATTATGTACGGAAATGTTATTGGAGCACTATCTACTTTCTTAGCATATGAAGCAAACATTTTA
CAAAATGTAGATGCGTTTTTCCAAGGAAGCTTCACGTTAGTTGTATCTGGGCGCTATGAGCTTCTATATGTAGCTGTACC
AGCGATCATTATTGCTTATATATATGCCAATAAGTTTACTGTTGCAGGTATGGGTGAGGATTTTGCTAAAAATCTAGGTT
TAAGTTATCGAACAGTGTTGAATATTGGTTTAATAATTGTGGCTATTATTACGACAACAGTTATTTTAACTGTTGGTGTA
ATTCCGTTCTTGGGATTAATAGTGCCAAACCTTGTTTCTCTGTATTTAGGGGATAATTTGCGTAAAACGATACCCCATAC
TATTTTTATGGGTGCAGCATTTTTATTGTTCTGTGATATTATTAGCCGCTTAATCGTACATCCATATGAAATTCCCGTTA
ACACAACCGTTGCAGTAATCGGTAGTGTGATCTTCTTAATTATGTTGTTTAGGGGGAAAGCATATGCGCAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.371

0.535

Multiple sequence alignment