Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   ACN6MT_RS24265 Genome accession   NZ_CP183883
Coordinates   4947743..4949506 (-) Length   587 a.a.
NCBI ID   WP_419888426.1    Uniprot ID   -
Organism   Neobacillus niacini strain BE6     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 4942743..4954506
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN6MT_RS24250 (ACN6MT_24250) - 4942970..4943704 (+) 735 WP_419888423.1 SH3 domain-containing protein -
  ACN6MT_RS24255 (ACN6MT_24255) fbp 4943758..4945689 (-) 1932 WP_419888424.1 fructose-1,6-bisphosphatase -
  ACN6MT_RS24260 (ACN6MT_24260) rcrQ 4945918..4947750 (-) 1833 WP_419888425.1 ABC transporter ATP-binding protein Regulator
  ACN6MT_RS24265 (ACN6MT_24265) rcrP 4947743..4949506 (-) 1764 WP_419888426.1 ABC transporter ATP-binding protein Regulator
  ACN6MT_RS24270 (ACN6MT_24270) - 4949599..4950024 (-) 426 WP_063255343.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACN6MT_RS24275 (ACN6MT_24275) - 4950164..4950694 (-) 531 WP_419888427.1 helix-turn-helix domain-containing protein -
  ACN6MT_RS24280 (ACN6MT_24280) - 4950844..4952145 (-) 1302 WP_419888428.1 TRAP transporter large permease -
  ACN6MT_RS24285 (ACN6MT_24285) - 4952168..4952647 (-) 480 WP_419888429.1 TRAP transporter small permease -
  ACN6MT_RS24290 (ACN6MT_24290) - 4952795..4953823 (-) 1029 WP_419888430.1 TRAP transporter substrate-binding protein -

Sequence

Protein


Download         Length: 587 a.a.        Molecular weight: 65170.84 Da        Isoelectric Point: 7.1081

>NTDB_id=1106721 ACN6MT_RS24265 WP_419888426.1 4947743..4949506(-) (rcrP) [Neobacillus niacini strain BE6]
MLKIFKYLQKKDWVLIVCSLIFIVTQVYLDLKLPDYMREVTVLVQMEGSKMSDVLLNGGYMILCAVGSMVAAMIVGFFAA
KVAAGFSVRLRAMVFEKTMSFSMEEINGFSTPSLITRSTNDITQIQMLIAMGLQVVIKAPILAVWAIFKIMGKSWQWTAT
TGIAVAILIIMLTILIFVALPKFKVIQSLTDNLNTVSRENLSGIRVVHAYNAEKYQEAKFEKANDELTKTNLFTSRTMTI
IMPTMGIIMSGMSLAIYWIGAYLINDAALPNRLSLFSDMVVFSSYAMQVIMAFMMLSFVFIMLPRASVSAKRINEVLDTE
ATIMDGTETEGKKDHSGEVEFRNVSFKYPDASDYILRNVSFTAHKGETVAFIGSTGSGKSTLLNLIPRYFDATEGEVLID
GLNVKNYHQEALRNKLGYVSQKAVLFSGTVSSNVAYGESGKNSAKDHAVKKAVEIAQGTEFVEKMENQYEAPIAQGGTNI
SGGQKQRLSIARALYRQPEIYIFDDSFSALDYKTDRTLRSVLKKETQGATTLIVGQRIGTIKDADTIVVLDHGEVVGIGT
HRELLRDCEVYQEIAYSQLSKEELEIG

Nucleotide


Download         Length: 1764 bp        

>NTDB_id=1106721 ACN6MT_RS24265 WP_419888426.1 4947743..4949506(-) (rcrP) [Neobacillus niacini strain BE6]
ATGCTGAAAATTTTTAAATATCTTCAAAAAAAGGATTGGGTACTAATCGTATGCAGTTTAATTTTCATCGTGACCCAGGT
GTATCTCGATTTAAAACTGCCTGACTATATGCGTGAAGTCACCGTGCTGGTTCAGATGGAAGGAAGTAAGATGAGCGATG
TTCTCCTAAATGGTGGTTATATGATTTTATGTGCTGTTGGAAGCATGGTAGCGGCTATGATTGTGGGATTCTTTGCAGCC
AAAGTCGCCGCTGGTTTTTCGGTTCGGCTTAGAGCGATGGTATTTGAGAAGACCATGTCTTTTTCAATGGAAGAAATCAA
TGGCTTTTCAACTCCTAGTTTGATTACACGCTCCACAAATGATATCACACAGATTCAAATGCTGATTGCTATGGGACTGC
AGGTAGTGATCAAAGCACCAATTTTAGCGGTGTGGGCAATCTTTAAGATTATGGGAAAAAGCTGGCAGTGGACGGCCACT
ACTGGTATTGCCGTTGCCATCCTCATCATCATGTTAACAATCCTTATTTTTGTTGCTCTGCCGAAATTTAAGGTGATTCA
GAGTTTAACAGATAACTTGAATACTGTTTCAAGAGAAAACTTGTCTGGTATCAGGGTGGTTCATGCCTACAATGCCGAAA
AGTACCAGGAAGCGAAATTTGAAAAAGCAAACGACGAACTGACCAAGACGAATCTTTTTACCAGCCGGACAATGACCATC
ATCATGCCGACAATGGGTATCATTATGTCAGGTATGAGTCTAGCTATCTATTGGATTGGTGCGTACTTGATAAATGATGC
GGCTCTGCCTAATCGATTATCTTTGTTCTCAGATATGGTCGTTTTCTCTTCCTATGCTATGCAGGTAATTATGGCATTTA
TGATGCTTTCTTTCGTATTTATCATGCTGCCAAGGGCGTCTGTTTCTGCCAAACGGATTAATGAAGTCCTGGATACCGAG
GCAACCATCATGGATGGAACAGAAACGGAAGGAAAGAAGGATCACTCCGGCGAGGTTGAATTCCGGAATGTGAGTTTTAA
ATATCCAGATGCTTCCGATTATATCCTTCGAAATGTCAGCTTTACTGCACACAAAGGAGAAACAGTGGCATTTATCGGGT
CCACCGGCAGTGGGAAAAGTACACTGCTTAATCTGATTCCCCGCTATTTTGATGCAACGGAAGGGGAAGTATTGATTGAT
GGTCTGAATGTGAAAAATTATCATCAGGAGGCATTACGTAATAAACTTGGTTATGTATCTCAAAAAGCCGTATTGTTCAG
CGGTACTGTTTCTTCCAATGTAGCTTATGGTGAAAGTGGCAAGAATTCAGCAAAGGACCATGCCGTTAAGAAGGCAGTGG
AAATTGCACAAGGTACCGAATTTGTTGAGAAAATGGAAAACCAGTATGAGGCTCCCATAGCTCAAGGTGGTACCAATATC
TCCGGCGGACAGAAGCAAAGACTGTCCATCGCCCGTGCGTTATATAGACAGCCGGAAATCTATATTTTTGATGATTCATT
TTCCGCACTAGATTATAAGACTGATAGAACATTGCGGTCTGTTCTAAAAAAAGAAACGCAAGGGGCAACTACATTAATTG
TTGGACAACGAATTGGTACCATTAAGGATGCAGATACAATCGTTGTACTGGATCATGGTGAAGTGGTTGGGATTGGCACC
CATCGTGAGCTCTTGAGGGATTGTGAAGTTTACCAGGAAATTGCCTATTCTCAGTTGTCAAAGGAGGAACTTGAAATTGG
CTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-506)

ABC transporter transmembrane region (ABC_membrane)

(44-293)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

54.925

100

0.56

Multiple sequence alignment