Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACN6MT_RS01390 Genome accession   NZ_CP183883
Coordinates   292334..293284 (-) Length   316 a.a.
NCBI ID   WP_419954515.1    Uniprot ID   -
Organism   Neobacillus niacini strain BE6     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 287334..298284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN6MT_RS01365 (ACN6MT_01365) - 288762..289247 (+) 486 WP_419954511.1 hypothetical protein -
  ACN6MT_RS01370 (ACN6MT_01370) - 289312..289617 (-) 306 WP_034672718.1 antibiotic biosynthesis monooxygenase family protein -
  ACN6MT_RS01375 (ACN6MT_01375) - 289667..290614 (-) 948 WP_419954512.1 siderophore ABC transporter substrate-binding protein -
  ACN6MT_RS01380 (ACN6MT_01380) - 290633..291394 (-) 762 WP_419954513.1 ABC transporter ATP-binding protein -
  ACN6MT_RS01385 (ACN6MT_01385) - 291391..292341 (-) 951 WP_419954514.1 iron chelate uptake ABC transporter family permease subunit -
  ACN6MT_RS01390 (ACN6MT_01390) ceuB 292334..293284 (-) 951 WP_419954515.1 ABC transporter permease Machinery gene
  ACN6MT_RS01395 (ACN6MT_01395) - 293630..294142 (+) 513 WP_419956360.1 redoxin domain-containing protein -
  ACN6MT_RS01400 (ACN6MT_01400) - 294192..294506 (-) 315 WP_034672699.1 DMT family transporter -
  ACN6MT_RS01405 (ACN6MT_01405) - 294506..294868 (-) 363 WP_419954516.1 DMT family transporter -
  ACN6MT_RS01410 (ACN6MT_01410) - 294994..296766 (+) 1773 WP_419954517.1 ABC transporter ATP-binding protein -
  ACN6MT_RS01415 (ACN6MT_01415) - 296789..298057 (-) 1269 WP_419954518.1 MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34807.99 Da        Isoelectric Point: 10.0640

>NTDB_id=1106688 ACN6MT_RS01390 WP_419954515.1 292334..293284(-) (ceuB) [Neobacillus niacini strain BE6]
MKKRYLLLALIVLSAASLFVGVSSISPLDLLDFQSEETQIFLISRFPRLVAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANATMLEKMAVAFVFALAGTFVFMQILDRIKFKDAIFIPLVGLMFGNILSSVTTFFAYRADVI
QNMSAWLQGDFSMIMKGRYELLYISIPILIIAYFYANRFTVAGMGEDFSKNLGLAYRRVVNIGLILVALVTTTVVLTVGI
IPFLGLIIPNIISIFKGDHLQKTLPHTALLGAIFLLVCDILGRVLIYPYEISISLMVGVIGSGIFLYLLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1106688 ACN6MT_RS01390 WP_419954515.1 292334..293284(-) (ceuB) [Neobacillus niacini strain BE6]
ATGAAGAAAAGATATTTACTGCTAGCATTAATAGTTTTATCTGCTGCTTCCTTATTTGTTGGGGTTAGCAGTATCTCTCC
ATTGGACTTGTTAGATTTCCAATCAGAGGAGACGCAAATTTTCCTTATCAGCAGATTTCCAAGGCTTGTTGCGATTTTAC
TTGCAGGTGCTGGGATGAGTATTGCTGGATTGATTATGCAGCAGCTCAGCAGGAACAAATTTGTTTCACCGACGACCGCA
GGAACATTAGACGCAACCCGGCTTGGTATCCTTGTCTCGATGTTGTTGTTTGCAAATGCAACTATGCTTGAAAAAATGGC
CGTTGCCTTTGTGTTTGCACTCGCTGGTACGTTTGTTTTCATGCAAATCCTAGATCGAATTAAGTTTAAGGATGCTATTT
TCATACCGCTTGTAGGGTTGATGTTTGGAAATATATTGTCCTCCGTGACGACTTTTTTTGCGTATCGTGCCGACGTCATT
CAAAACATGTCTGCTTGGCTGCAGGGGGATTTTTCAATGATTATGAAGGGCAGATACGAATTGCTCTACATAAGTATTCC
AATATTAATTATTGCGTATTTCTATGCAAACCGCTTTACAGTAGCTGGAATGGGTGAGGATTTTTCCAAAAATCTTGGTC
TTGCCTATCGCCGTGTGGTAAATATCGGGCTTATCCTTGTTGCACTCGTAACCACAACTGTGGTTCTGACCGTCGGAATT
ATCCCGTTTTTAGGCTTAATTATTCCAAATATCATCTCGATTTTTAAAGGCGATCACTTACAAAAAACATTGCCGCATAC
AGCACTCCTTGGGGCCATCTTCCTTCTGGTTTGCGATATTTTGGGCAGAGTGCTCATTTATCCGTACGAAATTTCAATCA
GTCTTATGGTCGGAGTAATAGGAAGCGGAATTTTCTTATACTTACTGTTCCGGAGGAAGGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.667

94.937

0.519

Multiple sequence alignment