Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACN6MX_RS17720 Genome accession   NZ_CP183878
Coordinates   3616042..3616992 (-) Length   316 a.a.
NCBI ID   WP_419960130.1    Uniprot ID   -
Organism   Psychrobacillus sp. BM2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3611042..3621992
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN6MX_RS17690 (ACN6MX_17690) - 3611312..3611671 (-) 360 WP_419960125.1 hypothetical protein -
  ACN6MX_RS17695 (ACN6MX_17695) - 3611772..3612422 (-) 651 WP_419960126.1 uracil-DNA glycosylase -
  ACN6MX_RS17700 (ACN6MX_17700) - 3612468..3613079 (-) 612 WP_419960127.1 phosphatase PAP2 family protein -
  ACN6MX_RS17705 (ACN6MX_17705) - 3613317..3614318 (-) 1002 WP_419960128.1 siderophore ABC transporter substrate-binding protein -
  ACN6MX_RS17710 (ACN6MX_17710) - 3614338..3615099 (-) 762 WP_093061620.1 ABC transporter ATP-binding protein -
  ACN6MX_RS17715 (ACN6MX_17715) - 3615096..3616049 (-) 954 WP_419960129.1 iron chelate uptake ABC transporter family permease subunit -
  ACN6MX_RS17720 (ACN6MX_17720) ceuB 3616042..3616992 (-) 951 WP_419960130.1 ABC transporter permease Machinery gene
  ACN6MX_RS17725 (ACN6MX_17725) - 3617254..3618099 (-) 846 WP_419960131.1 DUF6612 family protein -
  ACN6MX_RS17730 (ACN6MX_17730) - 3618175..3619662 (-) 1488 WP_419960132.1 peptide MFS transporter -
  ACN6MX_RS17735 (ACN6MX_17735) - 3619965..3621683 (+) 1719 WP_419962659.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34639.82 Da        Isoelectric Point: 9.9102

>NTDB_id=1106589 ACN6MX_RS17720 WP_419960130.1 3616042..3616992(-) (ceuB) [Psychrobacillus sp. BM2]
MKKRYLVIVLVALSLLSLFVGVSSISPMDLLDFNSEETEIFLISRVPRLIAIILAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDATRLGILISMLVFTNATYFQKISFAFIFALAGTLLFMQILNRIKFKDAIFVPLVGLMFGNILASITTFFAYKSDIV
QNISVWLQGDFSLILKGRYELLYISVPVLVIAYIFANRFTVAGMGEDFAKNLGLSYNKVLNLGLVLVALISTTVVLTVGM
IPFLGLIIPNIVSIFKGDHLEKTLPHTALLGVIFLLICDILGRVIIFPYEIPISMTVGVIGSAIFLFLLFRGKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1106589 ACN6MX_RS17720 WP_419960130.1 3616042..3616992(-) (ceuB) [Psychrobacillus sp. BM2]
ATGAAAAAAAGATATCTTGTAATTGTACTAGTAGCACTTTCTCTCTTATCTCTCTTTGTTGGTGTTTCAAGCATTTCGCC
AATGGATTTATTAGATTTTAACTCGGAAGAGACTGAAATTTTTCTTATAAGCAGAGTACCAAGATTAATCGCCATTATAC
TTGCAGGAGCGGGGATGAGCATTGCTGGTCTAATCATGCAAAGTCTTAGTAGGAATAAGTTTGTATCCCCTACTACAGCA
GGTACGCTTGATGCAACTCGCTTAGGAATTTTAATCTCGATGCTTGTATTTACAAACGCAACATATTTCCAAAAGATATC
CTTTGCATTTATATTCGCTTTAGCAGGAACACTGCTTTTCATGCAAATCTTGAATCGGATTAAATTTAAAGATGCAATAT
TTGTTCCACTTGTCGGGTTAATGTTCGGGAATATCTTAGCTTCTATCACGACGTTTTTCGCTTATAAATCAGATATTGTT
CAAAATATTTCTGTCTGGTTACAAGGAGATTTTTCCTTAATATTAAAAGGCAGATATGAACTACTTTACATAAGTGTACC
AGTACTGGTTATCGCCTATATTTTCGCAAATCGCTTTACTGTTGCAGGGATGGGTGAAGATTTTGCGAAAAATCTTGGTC
TATCGTACAACAAAGTATTGAATCTAGGTCTAGTACTAGTCGCTTTAATCTCTACGACTGTTGTTCTGACGGTCGGAATG
ATTCCATTTTTAGGATTAATCATCCCGAATATTGTCTCAATCTTTAAGGGAGATCATTTAGAGAAAACATTACCGCATAC
AGCATTACTAGGAGTTATTTTCTTATTGATTTGCGATATTTTAGGCAGGGTAATTATATTCCCTTATGAAATTCCGATTA
GCATGACTGTTGGTGTAATCGGAAGTGCAATCTTCCTATTCTTGTTGTTTAGGGGGAAGGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.313

99.051

0.538

Multiple sequence alignment