Detailed information NTG1106579

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACN6MX_RS11690
• Genome accession: NZ_CP183878
• Coordinates: 2386433..2388853 (-)
• Length: 806 a.a.
• NCBI ID: WP_419959087.1
• Uniprot ID: -
• Organism: Psychrobacillus sp. BM2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2381433..2393853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN6MX_RS11670 (ACN6MX_11670)	-	2382164..2382463 (-)	300	WP_419959085.1	DUF1292 domain-containing protein	-
ACN6MX_RS11675 (ACN6MX_11675)	ruvX	2382475..2382894 (-)	420	WP_211896182.1	Holliday junction resolvase RuvX	-
ACN6MX_RS11680 (ACN6MX_11680)	-	2382897..2383163 (-)	267	WP_090563918.1	IreB family regulatory phosphoprotein	-
ACN6MX_RS11685 (ACN6MX_11685)	alaS	2383242..2385875 (-)	2634	WP_419959086.1	alanine--tRNA ligase	-
ACN6MX_RS11690 (ACN6MX_11690)	recD2	2386433..2388853 (-)	2421	WP_419959087.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACN6MX_RS11695 (ACN6MX_11695)	-	2388875..2389531 (-)	657	WP_419959088.1	tetratricopeptide repeat protein	-
ACN6MX_RS11700 (ACN6MX_11700)	mnmA	2389546..2390658 (-)	1113	WP_419959089.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACN6MX_RS11705 (ACN6MX_11705)	-	2390755..2391885 (-)	1131	WP_419959090.1	cysteine desulfurase family protein	-
ACN6MX_RS11710 (ACN6MX_11710)	cymR	2391896..2392318 (-)	423	WP_419959091.1	cysteine metabolism transcriptional regulator CymR	-
ACN6MX_RS11715 (ACN6MX_11715)	-	2392455..2393741 (+)	1287	WP_419959092.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 806 a.a.
• Molecular weight: 90591.98 Da
• Isoelectric Point: 5.2910

>NTDB_id=1106579 ACN6MX_RS11690 WP_419959087.1 2386433..2388853(-) (recD2) [Psychrobacillus sp. BM2]
MTNEINNDKQFITGRPIVSIFHNPQNLFSIIKVKIKSTNTTYTDKEVIVSGYFPPLVLEDPYKFIGYIKNHPKYGTQFQV
ETFQKEVPATEQGIIHYLSSDMFTGIGRKTAEQIVKKLGPNAINKILDDPEALDVVPRLSEEKKQTLRAVLEQNLGLEKV
MIQLNEWGFGPQIAMKIYQAYREETLTVLTKNPFRLIEEVEGVGFVKADELGYKLGIQGNHPDRIKAAIYHLLQTASLGE
GHVFLYAEQLLESVKQLLENAQREEIPYEAITKCCIELAEESRIVGEVNRFYIPSLYYSEVGIGSKIETLLAENDTHHQF
PLAEMKKHLGGIEERLGVQYAPTQINAIETALNASMTLLTGGPGTGKTTVVRGIVELYAELHGLSLDPKEWAKDKKPFPI
VLAAPTGRAAKRLSESTELPAMTIHRLLGFTGQEDADVEGKEIEGKLIIIDETSMLDTWLGHQLLKAIPKDAQVIFVGDQ
DQLPPVGPGQVLKDLLASKRIPTVELKDIYRQAEGSSIIELAHEMKQGMVPATLLDKTKDRSFIKASTDQIPKVVEQVLK
SALSKGHSIRDMQVLAPMYRGPAGIDALNKMIQEMVNPNTDGKRKEMVFGETIYRIGDKVLQLVNQPESHVFNGDMGEVI
SIFRAAETVEKKEMLIVSFDGNEVTYEKNDLNQLTLAYCCSVHKSQGSEFQTVIMPITRSYMKMLRRNLLYTGITRAKNF
LILCGDPEVFKFGVQRTDDLQRLTTLKDRLSNVEESEQEDKEIVKELESVGDQTEYTYLTAENYHKVDPLFGMNGITPYQ
FMDADN

Nucleotide

• Length: 2421 bp

>NTDB_id=1106579 ACN6MX_RS11690 WP_419959087.1 2386433..2388853(-) (recD2) [Psychrobacillus sp. BM2]
ATGACCAACGAGATAAATAATGACAAACAATTTATTACAGGTCGTCCTATCGTTTCGATTTTTCATAACCCTCAAAACTT
ATTTTCTATCATAAAAGTAAAAATCAAGTCCACAAACACTACATACACAGACAAAGAAGTAATTGTATCTGGTTATTTCC
CTCCATTAGTACTGGAAGACCCATATAAATTCATTGGTTATATAAAAAATCATCCTAAATATGGCACTCAATTCCAAGTA
GAAACATTTCAAAAAGAAGTGCCAGCGACAGAGCAAGGAATCATTCATTACCTCTCGAGTGACATGTTCACAGGTATTGG
TCGTAAAACAGCAGAACAAATTGTAAAAAAACTCGGACCAAACGCTATTAACAAAATATTAGATGACCCAGAAGCATTGG
ATGTAGTGCCTCGTCTTTCTGAAGAGAAAAAACAAACACTACGGGCCGTTTTAGAACAAAATTTAGGCTTGGAAAAAGTG
ATGATTCAACTCAACGAATGGGGATTTGGACCTCAAATAGCTATGAAAATCTATCAAGCCTATAGAGAAGAAACGCTCAC
TGTTCTTACTAAAAATCCGTTCCGCTTAATCGAAGAGGTTGAGGGAGTAGGTTTTGTTAAAGCTGACGAGCTCGGCTATA
AATTAGGTATTCAAGGAAATCACCCGGATCGTATTAAGGCAGCAATATATCACCTACTTCAAACAGCATCGTTAGGAGAA
GGTCATGTATTTTTATATGCAGAGCAATTATTAGAATCTGTTAAACAACTATTAGAAAATGCTCAGCGTGAAGAGATACC
GTATGAAGCAATTACTAAATGCTGCATTGAACTTGCGGAAGAAAGCCGGATTGTCGGAGAAGTGAATCGTTTCTATATTC
CATCTTTATATTATTCCGAAGTTGGAATTGGTTCTAAAATTGAAACGCTTCTAGCTGAAAATGATACGCATCATCAATTT
CCTCTAGCAGAGATGAAAAAGCATCTTGGAGGTATTGAAGAACGTTTAGGGGTGCAATATGCCCCGACTCAGATTAATGC
GATTGAAACAGCGTTAAATGCAAGTATGACCTTGCTAACAGGAGGTCCCGGTACAGGTAAAACAACTGTTGTGCGAGGAA
TCGTGGAACTTTATGCAGAGCTTCATGGGCTTTCGCTGGATCCGAAGGAGTGGGCAAAAGACAAGAAACCATTTCCTATA
GTTTTGGCTGCGCCAACTGGTAGAGCGGCCAAACGCCTAAGCGAATCAACGGAATTACCAGCTATGACTATTCATAGATT
ATTAGGCTTTACTGGTCAAGAGGATGCAGATGTAGAAGGCAAAGAAATAGAAGGTAAACTAATTATTATTGATGAAACAT
CTATGTTAGATACCTGGTTAGGACATCAATTATTAAAGGCTATTCCAAAAGATGCCCAAGTTATTTTTGTTGGGGACCAA
GACCAACTCCCACCGGTAGGACCTGGGCAGGTATTAAAGGATTTGCTTGCTTCTAAACGAATTCCTACAGTCGAACTTAA
AGATATTTACCGACAAGCAGAAGGGTCCTCGATTATAGAACTAGCCCATGAGATGAAGCAAGGGATGGTCCCGGCAACTC
TATTGGACAAGACAAAGGATCGTTCCTTCATTAAGGCTTCTACCGATCAAATTCCCAAAGTGGTGGAGCAAGTATTAAAA
AGTGCATTATCCAAAGGACATTCCATACGAGATATGCAAGTATTAGCACCTATGTATAGAGGTCCAGCAGGTATTGATGC
ACTCAACAAAATGATTCAAGAAATGGTCAACCCAAATACGGATGGAAAGCGAAAAGAAATGGTTTTTGGTGAAACTATCT
ATCGTATTGGAGATAAAGTACTTCAATTAGTCAATCAGCCAGAGAGTCATGTGTTTAATGGAGATATGGGGGAAGTCATT
AGTATTTTCAGGGCTGCTGAAACTGTCGAGAAAAAAGAAATGTTAATTGTTTCATTTGATGGCAATGAAGTAACCTACGA
AAAAAATGATTTAAATCAGCTCACTTTAGCTTATTGCTGCTCCGTTCATAAATCACAAGGTAGTGAATTTCAAACGGTTA
TCATGCCTATAACAAGAAGTTATATGAAGATGTTAAGACGAAATTTACTTTATACTGGAATTACACGAGCTAAAAACTTT
CTCATTTTATGTGGAGATCCTGAAGTATTTAAATTCGGAGTTCAGAGAACTGACGATTTGCAGCGCTTGACTACGTTAAA
AGACCGCTTGTCTAATGTGGAAGAATCAGAGCAAGAAGATAAAGAAATAGTAAAAGAATTAGAATCAGTTGGAGATCAAA
CTGAGTACACATACCTAACTGCAGAAAATTATCATAAGGTCGACCCCCTTTTTGGTATGAATGGTATTACACCATATCAA
TTTATGGATGCAGACAATTGA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (340-548)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (588-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (677-724)

• Helix-hairpin-helix containing domain (HHH_RecD2) (156-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	55.528	98.759	0.548