Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACN4IM_RS03475 Genome accession   NZ_CP183859
Coordinates   731063..731689 (+) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter hormaechei strain K1326     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 726063..736689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN4IM_RS03455 - 726462..728222 (-) 1761 WP_023305819.1 AAA family ATPase -
  ACN4IM_RS03460 matP 728409..728861 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  ACN4IM_RS03465 ompA 728927..729979 (-) 1053 WP_017694761.1 porin OmpA -
  ACN4IM_RS03470 sulA 730336..730845 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  ACN4IM_RS03475 sxy/tfoX 731063..731689 (+) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  ACN4IM_RS03480 yccS 731646..733808 (-) 2163 WP_023305820.1 YccS family putative transporter -
  ACN4IM_RS03485 - 733827..734273 (-) 447 WP_023299745.1 YccF domain-containing protein -
  ACN4IM_RS03490 helD 734396..736450 (+) 2055 WP_032676335.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=1106497 ACN4IM_RS03475 WP_023299743.1 731063..731689(+) (sxy/tfoX) [Enterobacter hormaechei strain K1326]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1106497 ACN4IM_RS03475 WP_023299743.1 731063..731689(+) (sxy/tfoX) [Enterobacter hormaechei strain K1326]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTATTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACTAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment