Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACN4IK_RS08135 Genome accession   NZ_CP183849
Coordinates   1694456..1695082 (+) Length   208 a.a.
NCBI ID   WP_022647658.1    Uniprot ID   A0A431SK42
Organism   Enterobacter hormaechei strain K672     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1689456..1700082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN4IK_RS08115 - 1689855..1691615 (-) 1761 WP_022647656.1 AAA family ATPase -
  ACN4IK_RS08120 matP 1691802..1692254 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  ACN4IK_RS08125 ompA 1692320..1693372 (-) 1053 WP_017694761.1 porin OmpA -
  ACN4IK_RS08130 sulA 1693729..1694238 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  ACN4IK_RS08135 sxy/tfoX 1694456..1695082 (+) 627 WP_022647658.1 TfoX/Sxy family DNA transformation protein Regulator
  ACN4IK_RS08140 yccS 1695039..1697201 (-) 2163 WP_022647659.1 YccS family putative transporter -
  ACN4IK_RS08145 - 1697220..1697666 (-) 447 WP_022647660.1 YccF domain-containing protein -
  ACN4IK_RS08150 helD 1697789..1699843 (+) 2055 WP_022647661.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23940.50 Da        Isoelectric Point: 9.4592

>NTDB_id=1106456 ACN4IK_RS08135 WP_022647658.1 1694456..1695082(+) (sxy/tfoX) [Enterobacter hormaechei strain K672]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSVLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1106456 ACN4IK_RS08135 WP_022647658.1 1694456..1695082(+) (sxy/tfoX) [Enterobacter hormaechei strain K672]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCGTCCTCTGTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A431SK42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment