Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACN6M2_RS29545 Genome accession   NZ_CP183838
Coordinates   5898154..5899107 (-) Length   317 a.a.
NCBI ID   WP_419878107.1    Uniprot ID   -
Organism   Brevibacillus centrosporus strain L3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5893154..5904107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN6M2_RS29520 (ACN6M2_29520) - 5894417..5894863 (+) 447 WP_092271896.1 hypothetical protein -
  ACN6M2_RS29525 (ACN6M2_29525) - 5894851..5895150 (+) 300 WP_122926318.1 YxcD family protein -
  ACN6M2_RS29530 (ACN6M2_29530) - 5895376..5896347 (-) 972 WP_419878106.1 siderophore ABC transporter substrate-binding protein -
  ACN6M2_RS29535 (ACN6M2_29535) - 5896461..5897219 (-) 759 WP_400583557.1 ABC transporter ATP-binding protein -
  ACN6M2_RS29540 (ACN6M2_29540) - 5897213..5898157 (-) 945 WP_400583559.1 iron chelate uptake ABC transporter family permease subunit -
  ACN6M2_RS29545 (ACN6M2_29545) ceuB 5898154..5899107 (-) 954 WP_419878107.1 ABC transporter permease Machinery gene
  ACN6M2_RS29550 (ACN6M2_29550) - 5899524..5900915 (-) 1392 WP_411502797.1 MATE family efflux transporter -
  ACN6M2_RS29555 (ACN6M2_29555) - 5901139..5901498 (+) 360 WP_122926324.1 response regulator -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35067.48 Da        Isoelectric Point: 9.6659

>NTDB_id=1106405 ACN6M2_RS29545 WP_419878107.1 5898154..5899107(-) (ceuB) [Brevibacillus centrosporus strain L3]
MKKRYLVIALILLSIASLFIGVKDISPLELFDLTEEKTQVMWISRVPRLISIIIAGVSMSIVGLIMQQLTRNKFVSPTTA
GTEDSVRFGILVSMMLFTDASPLLKMLVAFVFALLGTFVFMKILEKVKYKDSIFIPLVGLMFGNIIGSITTFFAYKYDLI
QNMSAWLHGDFSSVLKGSYELLYVSIPLVIIAYLFANKFTIAGMGEEFAINLGLNYKQVVNIGLCIVAMVTSVVILTVGT
IPFLGLIIPNIVTLYLGDNLKKSLAHTALLGAVFVLVCDILGRLIIFPYEISIGLMVGVIGSGIFIFLLMRRKAYDR

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1106405 ACN6M2_RS29545 WP_419878107.1 5898154..5899107(-) (ceuB) [Brevibacillus centrosporus strain L3]
ATGAAGAAGAGATATTTAGTTATAGCACTCATCCTGCTGTCGATAGCTTCCTTGTTTATTGGTGTGAAGGACATTTCTCC
GCTGGAGCTGTTCGATCTCACGGAAGAAAAGACGCAGGTAATGTGGATCAGTAGAGTCCCACGTTTGATCAGTATCATCA
TCGCGGGTGTCAGCATGAGTATCGTAGGTTTGATCATGCAGCAGCTGACGAGGAACAAATTCGTATCGCCTACCACGGCC
GGTACGGAGGATTCTGTCCGATTCGGTATCTTGGTCTCGATGATGCTGTTCACAGACGCGAGCCCACTGCTGAAGATGCT
GGTAGCTTTCGTGTTTGCTTTGCTGGGTACGTTTGTTTTTATGAAGATTCTCGAAAAGGTTAAGTACAAGGATTCGATTT
TCATTCCATTGGTTGGTTTGATGTTTGGGAATATCATCGGTTCCATCACGACGTTCTTCGCCTACAAGTACGACCTTATT
CAAAATATGTCTGCGTGGCTGCATGGGGATTTTTCCTCGGTTTTGAAAGGCAGCTACGAACTGCTGTATGTCAGTATTCC
GCTCGTCATCATCGCGTACCTGTTTGCCAACAAGTTCACGATTGCAGGCATGGGTGAGGAATTCGCCATCAACTTGGGTC
TGAACTACAAGCAGGTAGTCAATATCGGGCTTTGTATTGTAGCTATGGTGACCTCCGTCGTGATTCTGACGGTCGGGACG
ATTCCGTTTTTAGGCTTGATTATCCCTAACATTGTGACGTTGTACCTGGGGGATAACCTGAAAAAAAGCTTGGCCCACAC
TGCTCTCTTAGGTGCCGTATTCGTACTGGTCTGCGACATATTGGGACGCCTGATCATCTTCCCTTACGAAATATCCATCG
GATTGATGGTGGGAGTAATCGGTAGCGGGATCTTCATTTTCCTACTTATGAGAAGAAAGGCGTATGACCGATGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

55.449

98.423

0.546

Multiple sequence alignment