Detailed information NTG0110630

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: HW11_RS06300
• Genome accession: NZ_CP008873
• Coordinates: 1352957..1353982 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain F9670
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1347957..1358982

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HW11_RS06275 (HW11_06305)	aroE	1348159..1348983 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
HW11_RS06280 (HW11_06310)	hemF	1349041..1349958 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
HW11_RS06285 (HW11_06315)	-	1350149..1351126 (+)	978	WP_003097303.1	NADPH:quinone reductase	-
HW11_RS06290 (HW11_06320)	-	1351136..1351693 (-)	558	WP_016561457.1	L-threonylcarbamoyladenylate synthase	-
HW11_RS06295 (HW11_06325)	dprA	1351734..1352822 (-)	1089	WP_003118479.1	DNA-processing protein DprA	Machinery gene
HW11_RS06300 (HW11_06330)	tsaP	1352957..1353982 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
HW11_RS06305 (HW11_06335)	def	1354121..1354627 (+)	507	WP_003107059.1	peptide deformylase	-
HW11_RS06310 (HW11_06340)	fmt	1354682..1355626 (+)	945	WP_010793609.1	methionyl-tRNA formyltransferase	-
HW11_RS06315 (HW11_06345)	rsmB	1355623..1356927 (+)	1305	WP_003122291.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
HW11_RS06320 (HW11_06350)	trkA	1356954..1358327 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
HW11_RS06325 (HW11_06355)	-	1358476..1358793 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=110630 HW11_RS06300 WP_003097294.1 1352957..1353982(-) (tsaP) [Pseudomonas aeruginosa strain F9670]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=110630 HW11_RS06300 WP_003097294.1 1352957..1353982(-) (tsaP) [Pseudomonas aeruginosa strain F9670]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCACATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393