Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   V3C22_RS09860 Genome accession   NZ_CP183775
Coordinates   1999362..2000132 (+) Length   256 a.a.
NCBI ID   WP_002264637.1    Uniprot ID   -
Organism   Streptococcus mutans strain Xc     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1994362..2005132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V3C22_RS09845 (V3C22_09845) - 1995972..1996634 (-) 663 WP_002262652.1 YoaK family protein -
  V3C22_RS09850 (V3C22_09850) rlmH 1996991..1997470 (-) 480 WP_002262651.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V3C22_RS09855 (V3C22_09855) htrA 1997676..1998884 (+) 1209 WP_002262650.1 S1C family serine protease Regulator
  V3C22_RS09860 (V3C22_09860) spo0J 1999362..2000132 (+) 771 WP_002264637.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 256 a.a.        Molecular weight: 29506.19 Da        Isoelectric Point: 10.1578

>NTDB_id=1105988 V3C22_RS09860 WP_002264637.1 1999362..2000132(+) (spo0J) [Streptococcus mutans strain Xc]
MTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVIIK
KISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQG
HARLLLSIEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKKPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLKI
SFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 771 bp        

>NTDB_id=1105988 V3C22_RS09860 WP_002264637.1 1999362..2000132(+) (spo0J) [Streptococcus mutans strain Xc]
ATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAACTAA
AGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTTTTG
GCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATCAAA
AAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGAAGC
CAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGACCAT
ATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTGCACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAAGGA
CACGCACGACTTCTTTTAAGTATAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTTAAG
TGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAAAACCTTCAAAAGACATTTTTCTGGCAGAAA
AAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAAATT
TCTTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

99.609

100

0.996


Multiple sequence alignment