Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   V3C22_RS06840 Genome accession   NZ_CP183775
Coordinates   1418552..1419355 (-) Length   267 a.a.
NCBI ID   WP_002284492.1    Uniprot ID   -
Organism   Streptococcus mutans strain Xc     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1413552..1424355
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V3C22_RS06830 (V3C22_06830) smc 1414214..1417750 (-) 3537 WP_086616293.1 chromosome segregation protein SMC -
  V3C22_RS06835 (V3C22_06835) rnc 1417750..1418445 (-) 696 WP_002308038.1 ribonuclease III -
  V3C22_RS06840 (V3C22_06840) vicX 1418552..1419355 (-) 804 WP_002284492.1 MBL fold metallo-hydrolase Regulator
  V3C22_RS06845 (V3C22_06845) vicK 1419352..1420704 (-) 1353 WP_002264821.1 cell wall metabolism sensor histidine kinase VicK Regulator
  V3C22_RS06850 (V3C22_06850) vicR 1420697..1421404 (-) 708 WP_002262930.1 response regulator YycF Regulator
  V3C22_RS06855 (V3C22_06855) - 1421757..1422539 (+) 783 WP_002262931.1 amino acid ABC transporter ATP-binding protein -
  V3C22_RS06860 (V3C22_06860) - 1422536..1423348 (+) 813 WP_002262932.1 transporter substrate-binding domain-containing protein -
  V3C22_RS06865 (V3C22_06865) - 1423366..1424070 (+) 705 WP_002262933.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29751.80 Da        Isoelectric Point: 5.9430

>NTDB_id=1105951 V3C22_RS06840 WP_002284492.1 1418552..1419355(-) (vicX) [Streptococcus mutans strain Xc]
MTETGFRYSILASGSSGNSFYLETPQKRILIDAGLSGKKISQLMAEIDRKVDDVDAILVTHEHKDHIHGVGVLARKYGLD
VYANAETWQAMDGMIGKIDVSQKHIFDLGKTITFGDIDIESFGVSHDAAQPQFYRLMKDGKSFVILTDTGYVSDRMADLI
ENADGYLIESNHDIEILRSGIYPWSLKQRILSDKGHLSNDDGAETMVRTLGNKTKKIYLGHLSKENNVKELAHMTMKNAL
MQADLAVDHDFKIYDTSPDTALPLAKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1105951 V3C22_RS06840 WP_002284492.1 1418552..1419355(-) (vicX) [Streptococcus mutans strain Xc]
ATGACAGAAACAGGTTTTAGATACAGCATTCTGGCTTCTGGTTCAAGTGGCAATAGTTTTTATTTGGAAACTCCTCAAAA
GAGAATTTTAATTGATGCAGGCCTCTCAGGTAAGAAAATTAGTCAATTAATGGCAGAAATAGACCGAAAAGTAGATGATG
TTGATGCCATTTTAGTAACACATGAACATAAAGATCATATTCACGGTGTTGGTGTACTAGCTCGGAAATATGGTTTGGAT
GTCTATGCGAATGCAGAAACATGGCAAGCTATGGATGGCATGATTGGTAAAATTGATGTCAGCCAAAAACATATCTTTGA
TCTGGGGAAAACCATCACTTTTGGGGATATTGATATTGAAAGTTTTGGTGTTAGCCATGATGCTGCTCAACCACAGTTTT
ACCGCCTGATGAAAGACGGCAAGAGCTTTGTTATATTGACGGATACAGGTTATGTCAGTGATCGTATGGCAGATCTGATT
GAAAATGCTGATGGTTATCTGATTGAGTCCAATCATGATATTGAAATTTTACGCTCAGGTATCTACCCTTGGAGTTTAAA
ACAGCGTATTTTATCCGATAAAGGACACCTATCAAATGATGATGGTGCAGAAACAATGGTTCGAACTTTGGGGAATAAAA
CAAAAAAGATTTATTTGGGACATCTCAGCAAAGAAAACAATGTCAAAGAATTAGCCCATATGACGATGAAGAATGCTCTC
ATGCAGGCAGATTTGGCTGTAGATCATGATTTTAAGATTTATGATACCTCGCCAGATACTGCTTTACCATTAGCAAAAAT
CTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

99.625

100

0.996

Multiple sequence alignment