Detailed information NTG1105770

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACN262_RS33650
• Genome accession: NZ_CP183460
• Coordinates: 3812834..3814015 (+)
• Length: 393 a.a.
• NCBI ID: WP_098181562.1
• Uniprot ID: -
• Organism: Burkholderia gladioli strain BG-GF5
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3807834..3819015

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN262_RS33620 (ACN262_33615)	-	3808452..3809066 (+)	615	WP_013699419.1	50S ribosomal protein L25/general stress protein Ctc	-
ACN262_RS33625 (ACN262_33620)	pth	3809163..3809768 (+)	606	WP_025097010.1	aminoacyl-tRNA hydrolase	-
ACN262_RS33630 (ACN262_33625)	hisC	3809864..3810931 (+)	1068	WP_017918296.1	histidinol-phosphate transaminase	-
ACN262_RS33635 (ACN262_33630)	-	3811078..3811350 (-)	273	WP_105828742.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACN262_RS33640 (ACN262_33635)	coaD	3811417..3811917 (-)	501	WP_013699423.1	pantetheine-phosphate adenylyltransferase	-
ACN262_RS33645 (ACN262_33640)	rsmD	3812029..3812643 (-)	615	WP_025097013.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACN262_RS33650 (ACN262_33645)	pilA	3812834..3814015 (+)	1182	WP_098181562.1	signal recognition particle-docking protein FtsY	Machinery gene
ACN262_RS33655 (ACN262_33650)	maiA	3814088..3814732 (-)	645	WP_017918780.1	maleylacetoacetate isomerase	-
ACN262_RS33660 (ACN262_33655)	ybiB	3814946..3815926 (+)	981	WP_105828180.1	DNA-binding protein YbiB	-
ACN262_RS33665 (ACN262_33660)	leuA	3816426..3818078 (+)	1653	WP_025097017.1	2-isopropylmalate synthase	-
ACN262_RS33670 (ACN262_33665)	-	3818260..3818646 (-)	387	WP_013699429.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 41410.47 Da
• Isoelectric Point: 4.8819

>NTDB_id=1105770 ACN262_RS33650 WP_098181562.1 3812834..3814015(+) (pilA) [Burkholderia gladioli strain BG-GF5]
MFSFFKRLIGSKADGAPTDDQDAPTDRQDDAEAPAAEAPRPVERVAAPTPAPAVPVEPAAPAQVAPALPAAAHEDEAQAV
TAVEIVPPPAPEPAAKKSWIARLRSGLSKTSSSLTSVFVSTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVKAER
LTDPQQVKAALRGLLIALLAPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQL
AIWGERNNVTVVQQESGDPAAVIFDAVGAARARKINVVMADTAGRLPTQLHLMEELRKVKRVIGKAQADAPHEVLLVIDA
NTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFNAEEFTDALLG

Nucleotide

• Length: 1182 bp

>NTDB_id=1105770 ACN262_RS33650 WP_098181562.1 3812834..3814015(+) (pilA) [Burkholderia gladioli strain BG-GF5]
ATGTTCAGCTTCTTCAAACGATTGATCGGCTCGAAGGCCGACGGCGCGCCGACCGACGACCAGGACGCGCCGACGGACCG
GCAGGACGACGCCGAGGCGCCCGCGGCCGAAGCGCCCCGGCCCGTCGAGCGGGTCGCCGCGCCGACGCCGGCGCCGGCGG
TTCCGGTCGAGCCGGCCGCGCCCGCGCAAGTCGCCCCTGCTCTCCCCGCCGCCGCGCACGAAGACGAAGCGCAGGCCGTC
ACGGCCGTCGAGATCGTGCCGCCGCCCGCGCCGGAGCCGGCCGCCAAGAAATCCTGGATCGCGCGCCTGCGCTCGGGCCT
GTCGAAGACCAGTTCGAGCCTGACCAGCGTGTTCGTCAGCACCAAGATCGACGAGGATCTCTACGAGGAGCTCGAGACCG
CGCTGCTGATGTCCGACGCCGGCGTCGACGCCACCGAGTACCTGCTCGGCGCGCTGCGCGAGAAGGTCAAGGCCGAGCGG
CTGACCGATCCGCAGCAGGTCAAGGCGGCCCTGCGCGGCCTGCTGATCGCGCTGCTCGCGCCGCTCGAGAAGTCGCTGAT
GCTGGGCCGCGCGCAGCCGCTGGTGATGATGATCGCGGGCGTCAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGG
CCAAGCACCTGCAGAGCTTCGACCAGTCGGTGCTGCTGGCCGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTC
GCGATATGGGGCGAGCGCAACAACGTGACGGTGGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGT
GGGCGCCGCGCGCGCGCGCAAGATCAACGTGGTGATGGCCGATACGGCGGGCCGCCTGCCCACCCAGCTGCACCTGATGG
AGGAGCTGCGCAAGGTCAAGCGCGTGATCGGCAAGGCACAGGCCGACGCGCCGCACGAGGTGCTGCTGGTGATCGACGCC
AACACCGGCCAGAACGCGCTCGCCCAGGTAAAGGCCTTCGACGACGCGCTGGGCCTCACCGGCCTGATCGTCACCAAGCT
CGACGGCACCGCGAAAGGCGGCATCCTCGCCGCGATCGCGCGGCAGCGGCCGGTGCCGGTCTACTTCATCGGCGTCGGCG
AGAAGGTGGAGGACCTGCAGCCCTTCAATGCCGAGGAGTTCACCGACGCGCTGCTGGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (194-392)

• SRP54-type protein, helical bundle domain (SRP54_N) (112-172)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.306	100	0.55