Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACNSPE_RS21475 Genome accession   NZ_CP183326
Coordinates   4304355..4305311 (-) Length   318 a.a.
NCBI ID   WP_131237193.1    Uniprot ID   A0A4R1AU00
Organism   Cytobacillus praedii strain MM2025     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4299355..4310311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNSPE_RS21450 (ACNSPE_21450) - 4299863..4300300 (+) 438 WP_057766338.1 Dps family protein -
  ACNSPE_RS21455 (ACNSPE_21455) - 4300441..4301067 (+) 627 WP_419393030.1 pyridoxamine 5'-phosphate oxidase family protein -
  ACNSPE_RS21460 (ACNSPE_21460) - 4301352..4302395 (-) 1044 WP_419393031.1 siderophore ABC transporter substrate-binding protein -
  ACNSPE_RS21465 (ACNSPE_21465) - 4302648..4303415 (-) 768 WP_057766331.1 ABC transporter ATP-binding protein -
  ACNSPE_RS21470 (ACNSPE_21470) - 4303412..4304368 (-) 957 WP_131237195.1 iron chelate uptake ABC transporter family permease subunit -
  ACNSPE_RS21475 (ACNSPE_21475) ceuB 4304355..4305311 (-) 957 WP_131237193.1 ABC transporter permease Machinery gene
  ACNSPE_RS21480 (ACNSPE_21480) - 4305573..4306364 (-) 792 WP_131237191.1 serine hydrolase -
  ACNSPE_RS21485 (ACNSPE_21485) - 4306361..4307371 (-) 1011 WP_131237188.1 ABC transporter ATP-binding protein -
  ACNSPE_RS21490 (ACNSPE_21490) - 4307390..4307719 (-) 330 WP_419393032.1 C40 family peptidase -
  ACNSPE_RS21495 (ACNSPE_21495) - 4307893..4308303 (-) 411 WP_419393033.1 hypothetical protein -
  ACNSPE_RS21500 (ACNSPE_21500) - 4308287..4309395 (-) 1109 Protein_4223 dipeptide epimerase -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34858.04 Da        Isoelectric Point: 9.5543

>NTDB_id=1105306 ACNSPE_RS21475 WP_131237193.1 4304355..4305311(-) (ceuB) [Cytobacillus praedii strain MM2025]
MKLWMLIIATIVLSFVSLFIGAIDIKVSDLLDWHSDETQIFLISRVPRLMAIILAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDAAKLGILISMLFLTNVTYTQQVIFSFVFALAGTFVFMQILDRIKFKDVIFVPLIGIMYGNILSSITTFFAYEADLL
QNISSWLMGSFTLVIAGRYELLYVSVPAVILAYIYANKFTVAGMGEDFAKNLGLSYKLVLNIGLILVAIISTTVVLTVGV
IPFLGLIVPNIVSLYLGDNLRKTIPHTAVLGVVFLLICDIIGRIVIHPYEIPVNVTVAVIGSAIFLIMLFRGRAYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=1105306 ACNSPE_RS21475 WP_131237193.1 4304355..4305311(-) (ceuB) [Cytobacillus praedii strain MM2025]
ATGAAACTATGGATGTTGATTATTGCAACTATAGTCCTGTCATTTGTATCGCTATTCATAGGTGCGATTGATATTAAGGT
AAGTGACTTGCTCGATTGGCATTCGGATGAGACACAAATTTTCTTAATTAGTCGAGTACCTCGTTTAATGGCGATTATAT
TGGCGGGAGCAGGAATGAGTATTGCAGGTTTAATTATGCAGTCATTAAGCCGAAATAAATTTGTATCGCCTACGACTGCT
GGTACGCTAGATGCCGCAAAACTAGGTATTTTAATCTCGATGCTGTTCTTAACAAATGTAACGTATACGCAGCAAGTTAT
TTTCAGCTTCGTATTTGCTTTAGCAGGTACATTTGTTTTTATGCAAATTTTAGATCGTATTAAATTTAAGGATGTCATCT
TTGTTCCGTTAATTGGGATTATGTACGGAAATATTTTGTCATCTATTACAACGTTTTTTGCATACGAGGCAGATCTTCTT
CAAAATATTTCTTCTTGGTTAATGGGGAGCTTCACATTAGTGATTGCTGGCCGTTATGAACTGTTGTATGTAAGTGTCCC
GGCGGTTATTTTAGCGTATATTTATGCGAATAAATTTACAGTCGCAGGTATGGGCGAAGATTTTGCAAAAAACTTAGGCT
TAAGTTATAAACTTGTGCTGAATATAGGTCTTATCCTTGTAGCGATTATTTCTACAACTGTCGTACTAACTGTCGGAGTG
ATTCCGTTTTTAGGTTTAATTGTACCTAATATCGTCTCTCTTTATTTAGGTGATAATTTACGCAAAACGATTCCGCATAC
AGCAGTATTAGGTGTTGTATTTCTATTAATATGTGACATTATAGGACGCATTGTTATTCACCCTTATGAGATCCCGGTTA
ATGTGACTGTGGCAGTAATCGGTAGTGCGATCTTCTTAATTATGTTATTTAGGGGGAGAGCATATGCGAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4R1AU00

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.747

99.371

0.544

Multiple sequence alignment