Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   ACNSPE_RS15565 Genome accession   NZ_CP183326
Coordinates   3098157..3099116 (-) Length   319 a.a.
NCBI ID   WP_131236782.1    Uniprot ID   A0A4R1AVS6
Organism   Cytobacillus praedii strain MM2025     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3093157..3104116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNSPE_RS15540 (ACNSPE_15540) - 3093954..3094664 (-) 711 WP_419392575.1 DUF2268 domain-containing protein -
  ACNSPE_RS15545 (ACNSPE_15545) fabF 3094945..3096183 (-) 1239 WP_057763861.1 beta-ketoacyl-ACP synthase II -
  ACNSPE_RS15550 (ACNSPE_15550) - 3096249..3097180 (-) 932 Protein_3073 beta-ketoacyl-ACP synthase III -
  ACNSPE_RS15555 (ACNSPE_15555) - 3097398..3097754 (+) 357 WP_057763857.1 hypothetical protein -
  ACNSPE_RS15560 (ACNSPE_15560) comZ 3097940..3098134 (-) 195 WP_057763855.1 ComZ family protein Regulator
  ACNSPE_RS15565 (ACNSPE_15565) med 3098157..3099116 (-) 960 WP_131236782.1 BMP family ABC transporter substrate-binding protein Regulator
  ACNSPE_RS15570 (ACNSPE_15570) - 3099249..3099746 (-) 498 WP_131236783.1 hypothetical protein -
  ACNSPE_RS15575 (ACNSPE_15575) - 3099827..3100567 (-) 741 WP_131236784.1 hydrolase -
  ACNSPE_RS15580 (ACNSPE_15580) - 3100786..3100977 (+) 192 WP_057763847.1 DUF2929 family protein -
  ACNSPE_RS15585 (ACNSPE_15585) clpB 3101019..3103625 (-) 2607 WP_419392576.1 ATP-dependent chaperone ClpB -
  ACNSPE_RS15590 (ACNSPE_15590) - 3103916..3104095 (-) 180 WP_057763843.1 YjzC family protein -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 35703.50 Da        Isoelectric Point: 5.2339

>NTDB_id=1105299 ACNSPE_RS15565 WP_131236782.1 3098157..3099116(-) (med) [Cytobacillus praedii strain MM2025]
MHKVILRFGMILLCLLLLASCGQAMSAGNLKKAGLLVPDTINDQVWGTKGYKGMLKIQSHHNIEVYYKEGMNSQMVVERA
VKEFDQKGVNIIFGHGNEYSEYFNKISKKYPNIHFVSFNGDAKNSNTTSLNFEAYAMGFFGGMIAGHMTKTDTIGIIAAY
EWQPEIEGFYEGANYENENVKVIIEYVGNWDDGTQAFQSLDRIFAKNADVIYPAGDGYNVPVIEKVKEKGHYAIGYISDQ
SDLGESAVLTSTIQHVDVLYELVAERFNEGKLKSGNLSFDFQDEVITLGKFSPNVDKEYVDLINAAIEKYKKTGKLPNE

Nucleotide


Download         Length: 960 bp        

>NTDB_id=1105299 ACNSPE_RS15565 WP_131236782.1 3098157..3099116(-) (med) [Cytobacillus praedii strain MM2025]
ATGCATAAAGTGATATTGCGTTTTGGGATGATCCTTTTATGCCTTCTTTTATTAGCCTCTTGTGGACAAGCAATGTCTGC
GGGAAATCTTAAGAAAGCTGGCTTGCTAGTCCCGGATACGATAAATGATCAAGTTTGGGGTACAAAAGGCTACAAAGGAA
TGCTAAAAATACAATCCCATCATAATATAGAAGTTTACTATAAAGAAGGCATGAACTCCCAAATGGTTGTGGAGCGTGCA
GTAAAAGAGTTCGATCAAAAAGGTGTCAATATTATATTTGGCCATGGGAATGAGTATTCTGAGTATTTTAACAAAATTTC
AAAGAAATATCCAAATATCCATTTTGTCAGTTTTAATGGTGACGCTAAAAATTCTAACACAACTAGCTTAAATTTCGAAG
CTTATGCGATGGGATTTTTCGGAGGAATGATTGCTGGGCATATGACAAAAACGGATACAATTGGCATAATTGCGGCATAT
GAGTGGCAACCTGAAATAGAAGGCTTCTATGAGGGTGCAAATTATGAGAATGAAAATGTAAAAGTAATTATTGAGTATGT
TGGCAATTGGGATGATGGTACGCAAGCATTTCAAAGTTTGGATAGGATTTTTGCCAAAAATGCAGATGTTATATATCCTG
CTGGAGATGGATACAATGTCCCGGTTATTGAAAAAGTGAAAGAAAAAGGACATTATGCAATAGGGTATATTTCAGATCAG
TCTGACCTTGGTGAATCAGCAGTATTAACAAGCACAATTCAGCATGTAGATGTCCTATATGAATTAGTAGCCGAGAGATT
CAATGAAGGGAAGCTAAAATCAGGAAACCTTTCTTTTGACTTTCAAGATGAAGTAATTACATTAGGTAAATTCAGCCCTA
ATGTAGACAAAGAATATGTTGATTTAATTAATGCCGCAATAGAAAAGTATAAAAAAACAGGAAAATTACCGAATGAATGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-318)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4R1AVS6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

51.274

98.433

0.505

Multiple sequence alignment