Detailed information NTG0110525

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACAK33_RS14855
• Genome accession: NZ_AP031588
• Coordinates: 3118246..3118947 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594579.1
• Uniprot ID: A0A0D5YJA0
• Organism: Acinetobacter baumannii strain JUNP712
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3113246..3123947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAK33_RS14825 (JUNP712_2950)	-	3113553..3113996 (-)	444	WP_001246675.1	SRPBCC family protein	-
ACAK33_RS14830 (JUNP712_2951)	tadA	3114066..3114569 (-)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
ACAK33_RS14835 (JUNP712_2952)	-	3114576..3115700 (-)	1125	WP_003114973.1	enoyl-CoA hydratase/isomerase family protein	-
ACAK33_RS14840 (JUNP712_2953)	ung	3115697..3116410 (-)	714	WP_001177527.1	uracil-DNA glycosylase	-
ACAK33_RS14845 (JUNP712_2954)	-	3116461..3117057 (-)	597	WP_000908449.1	6-carboxytetrahydropterin synthase	-
ACAK33_RS14850 (JUNP712_2955)	gspK	3117287..3118246 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
ACAK33_RS14855 (JUNP712_2956)	xcpW	3118246..3118947 (-)	702	WP_000594579.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACAK33_RS14860 (JUNP712_2957)	xcpV	3118947..3119327 (-)	381	WP_000836914.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACAK33_RS14865 (JUNP712_2958)	-	3119317..3119871 (-)	555	WP_000841373.1	type II secretion system protein	-
ACAK33_RS14870 (JUNP712_2959)	-	3119881..3120489 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACAK33_RS14875 (JUNP712_2960)	-	3120527..3121300 (-)	774	WP_000497300.1	TatD family hydrolase	-
ACAK33_RS14880 (JUNP712_2961)	-	3121318..3121659 (-)	342	WP_001183027.1	PilZ domain-containing protein	-
ACAK33_RS14885 (JUNP712_2962)	-	3121671..3122651 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
ACAK33_RS14890 (JUNP712_2963)	kdsB	3122663..3123424 (-)	762	WP_000680692.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26707.66 Da
• Isoelectric Point: 9.5501

>NTDB_id=110525 ACAK33_RS14855 WP_000594579.1 3118246..3118947(-) (xcpW) [Acinetobacter baumannii strain JUNP712]
MIKNKYIHIRSFSSRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLFKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=110525 ACAK33_RS14855 WP_000594579.1 3118246..3118947(-) (xcpW) [Acinetobacter baumannii strain JUNP712]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTTCTTCTCGTCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGTTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCGGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

3D structure

• AlphaFold DB: A0A0D5YJA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983