Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACAK33_RS14860 | Genome accession | NZ_AP031588 |
| Coordinates | 3118947..3119327 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii strain JUNP712 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3113947..3124327
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAK33_RS14830 (JUNP712_2951) | tadA | 3114066..3114569 (-) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
| ACAK33_RS14835 (JUNP712_2952) | - | 3114576..3115700 (-) | 1125 | WP_003114973.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACAK33_RS14840 (JUNP712_2953) | ung | 3115697..3116410 (-) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| ACAK33_RS14845 (JUNP712_2954) | - | 3116461..3117057 (-) | 597 | WP_000908449.1 | 6-carboxytetrahydropterin synthase | - |
| ACAK33_RS14850 (JUNP712_2955) | gspK | 3117287..3118246 (-) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| ACAK33_RS14855 (JUNP712_2956) | xcpW | 3118246..3118947 (-) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACAK33_RS14860 (JUNP712_2957) | xcpV | 3118947..3119327 (-) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACAK33_RS14865 (JUNP712_2958) | - | 3119317..3119871 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACAK33_RS14870 (JUNP712_2959) | - | 3119881..3120489 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACAK33_RS14875 (JUNP712_2960) | - | 3120527..3121300 (-) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| ACAK33_RS14880 (JUNP712_2961) | - | 3121318..3121659 (-) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| ACAK33_RS14885 (JUNP712_2962) | - | 3121671..3122651 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| ACAK33_RS14890 (JUNP712_2963) | kdsB | 3122663..3123424 (-) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=110526 ACAK33_RS14860 WP_000836914.1 3118947..3119327(-) (xcpV) [Acinetobacter baumannii strain JUNP712]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=110526 ACAK33_RS14860 WP_000836914.1 3118947..3119327(-) (xcpV) [Acinetobacter baumannii strain JUNP712]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |