Detailed information NTG1105188

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACNVED_RS12250
• Genome accession: NZ_CP183303
• Coordinates: 2839871..2840953 (-)
• Length: 360 a.a.
• NCBI ID: WP_419419295.1
• Uniprot ID: -
• Organism: Legionella sp. D16C41
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2834871..2845953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNVED_RS12225 (ACNVED_12225)	-	2835748..2835930 (-)	183	WP_419419291.1	CBU_0585 family protein	-
ACNVED_RS12230 (ACNVED_12230)	-	2836020..2836997 (+)	978	WP_419419292.1	adenosine deaminase	-
ACNVED_RS12235 (ACNVED_12235)	rpoH	2837271..2838131 (-)	861	WP_419419293.1	RNA polymerase sigma factor RpoH	-
ACNVED_RS12240 (ACNVED_12240)	ftsX	2838305..2839234 (-)	930	WP_419419294.1	permease-like cell division protein FtsX	-
ACNVED_RS12245 (ACNVED_12245)	ftsE	2839228..2839878 (-)	651	WP_419421185.1	cell division ATP-binding protein FtsE	-
ACNVED_RS12250 (ACNVED_12250)	pilA	2839871..2840953 (-)	1083	WP_419419295.1	signal recognition particle-docking protein FtsY	Machinery gene
ACNVED_RS12255 (ACNVED_12255)	-	2841014..2842351 (+)	1338	WP_419419296.1	M16 family metallopeptidase	-
ACNVED_RS12260 (ACNVED_12260)	-	2842335..2843639 (+)	1305	WP_419419297.1	M16 family metallopeptidase	-
ACNVED_RS12265 (ACNVED_12265)	rsmD	2843814..2844362 (+)	549	WP_419419298.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACNVED_RS12270 (ACNVED_12270)	dotD	2844496..2845077 (+)	582	WP_419419299.1	type IVB secretion system lipoprotein DotD	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 39466.36 Da
• Isoelectric Point: 6.1628

>NTDB_id=1105188 ACNVED_RS12250 WP_419419295.1 2839871..2840953(-) (pilA) [Legionella sp. D16C41]
MIKWFKRNQDASSKTAEPLKEPVEPLIEPELVNEELNTQTEPQLSTEVETTVKPSFYARFKQGLSKTRLQLGEGMGRLLL
GKKVIDDSIFEDLETLLLRADLGINTTQTILDQLSTGMLRKQLVDGDAVFKALKDRLETILVNNTAPLTLQTTDSSPFVI
LMVGVNGAGKTTTIGKLAKQYQQQGKKVMLAAGDTFRAAAVQQLQVWGERNQIPVIAQHSGADSASVVYDALQAAKARGI
DILIADTAGRLHTQNNLMEELKKVKRVMQKINPNAPHETMLVLDASIGQNALNQAREFHQAIGLTGITMTKLDGTAKGGI
LFAIANELAIPFRYIGIGEGIDDLRPFEATQFVKAIFNDD

Nucleotide

• Length: 1083 bp

>NTDB_id=1105188 ACNVED_RS12250 WP_419419295.1 2839871..2840953(-) (pilA) [Legionella sp. D16C41]
ATGATTAAATGGTTTAAAAGAAATCAGGATGCATCCTCTAAAACGGCAGAGCCACTTAAAGAGCCAGTAGAACCTTTAAT
AGAGCCTGAACTAGTTAACGAAGAGCTAAATACTCAAACTGAACCACAGCTGTCTACTGAGGTCGAGACTACAGTTAAAC
CTAGCTTTTATGCACGCTTTAAGCAGGGGTTAAGTAAGACGAGATTACAGCTAGGTGAGGGCATGGGTCGTTTATTACTT
GGTAAAAAAGTAATTGATGACTCTATTTTTGAAGATTTAGAAACATTATTGTTACGTGCTGATTTAGGAATCAATACCAC
CCAAACCATATTAGATCAATTAAGCACGGGCATGCTAAGAAAACAATTGGTTGACGGCGATGCAGTATTTAAAGCGCTTA
AGGATAGATTAGAAACCATACTTGTTAATAATACAGCGCCATTAACCTTACAAACTACTGATAGTTCACCCTTTGTCATT
TTAATGGTTGGTGTAAATGGTGCTGGTAAAACAACGACAATCGGTAAATTAGCTAAGCAATATCAGCAGCAAGGTAAAAA
AGTGATGTTGGCTGCTGGCGATACATTTAGGGCAGCTGCAGTGCAGCAATTGCAGGTTTGGGGTGAACGAAATCAAATAC
CTGTTATTGCTCAACACTCGGGCGCAGATAGTGCTTCAGTTGTTTATGATGCCTTGCAAGCGGCTAAAGCGCGTGGTATT
GATATTTTAATTGCAGATACAGCAGGTCGTCTACATACCCAAAATAATTTAATGGAAGAATTGAAAAAGGTTAAGCGTGT
AATGCAAAAAATCAACCCTAATGCGCCTCACGAAACTATGTTAGTTTTAGATGCGAGTATTGGGCAAAATGCGTTGAATC
AGGCACGTGAGTTTCATCAGGCTATTGGCTTAACTGGTATTACCATGACAAAATTAGATGGTACGGCGAAAGGTGGTATT
TTATTTGCTATCGCTAATGAGTTAGCTATTCCTTTTCGCTATATAGGTATAGGCGAAGGTATTGACGATCTGCGGCCTTT
TGAAGCTACCCAATTTGTTAAGGCAATTTTTAATGATGATTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (157-357)

• SRP54-type protein, helical bundle domain (SRP54_N) (71-137)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.297	96.389	0.494