Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   ACNR9X_RS01755 Genome accession   NZ_CP183293
Coordinates   322449..322847 (-) Length   132 a.a.
NCBI ID   WP_014304317.1    Uniprot ID   -
Organism   Bacillus velezensis strain F68     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 317449..327847
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR9X_RS01720 (ACNR9X_01720) - 318449..318613 (-) 165 WP_370648487.1 molybdopterin dinucleotide binding domain-containing protein -
  ACNR9X_RS01725 (ACNR9X_01725) - 318727..319929 (+) 1203 WP_032857854.1 GTP-binding protein -
  ACNR9X_RS01730 (ACNR9X_01730) - 319994..321130 (+) 1137 WP_003156594.1 zinc-dependent alcohol dehydrogenase -
  ACNR9X_RS01735 (ACNR9X_01735) - 321145..321579 (+) 435 WP_003156592.1 RDD family protein -
  ACNR9X_RS01740 (ACNR9X_01740) - 321696..321971 (+) 276 WP_369719109.1 YckD family protein -
  ACNR9X_RS01745 (ACNR9X_01745) - 322075..322191 (+) 117 WP_015388718.1 family 1 glycosylhydrolase -
  ACNR9X_RS01750 (ACNR9X_01750) - 322190..322408 (+) 219 Protein_304 family 1 glycosylhydrolase -
  ACNR9X_RS01755 (ACNR9X_01755) nin/comJ 322449..322847 (-) 399 WP_014304317.1 competence protein ComJ Regulator
  ACNR9X_RS01760 (ACNR9X_01760) nucA/comI 322869..323306 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  ACNR9X_RS01765 (ACNR9X_01765) hxlB 323665..324222 (-) 558 WP_003156587.1 6-phospho-3-hexuloisomerase -
  ACNR9X_RS01770 (ACNR9X_01770) hxlA 324219..324854 (-) 636 WP_024084873.1 3-hexulose-6-phosphate synthase -
  ACNR9X_RS01775 (ACNR9X_01775) - 325086..325448 (+) 363 WP_014304320.1 winged helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 15049.01 Da        Isoelectric Point: 4.6564

>NTDB_id=1105046 ACNR9X_RS01755 WP_014304317.1 322449..322847(-) (nin/comJ) [Bacillus velezensis strain F68]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVFRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISDLHADTYIIDADAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1105046 ACNR9X_RS01755 WP_014304317.1 322449..322847(-) (nin/comJ) [Bacillus velezensis strain F68]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCGTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTCGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCTTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTAATGTCAAAGCGGCTTTTCTTTAATATTCCAAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

77.519

97.727

0.758


Multiple sequence alignment