Detailed information NTG1104907

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ACN08Q_RS21060
• Genome accession: NZ_CP183255
• Coordinates: 2793001..2796387 (+)
• Length: 1128 a.a.
• NCBI ID: WP_419243713.1
• Uniprot ID: -
• Organism: Photobacterium leiognathi subsp. mandapamensis strain Sr1.18
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2788001..2801387

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN08Q_RS21045 (ACN08Q_20985)	hemL	2788777..2790075 (+)	1299	WP_305818418.1	glutamate-1-semialdehyde 2,1-aminomutase	-
ACN08Q_RS21050 (ACN08Q_20990)	-	2790434..2791519 (+)	1086	WP_008988489.1	AI-2E family transporter	-
ACN08Q_RS21055 (ACN08Q_20995)	rsmC	2791678..2792700 (+)	1023	WP_008988490.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ACN08Q_RS21060 (ACN08Q_21000)	chiS	2793001..2796387 (+)	3387	WP_419243713.1	response regulator	Regulator
ACN08Q_RS21065 (ACN08Q_21005)	-	2797166..2798842 (+)	1677	WP_008988492.1	ABC transporter substrate-binding protein	-
ACN08Q_RS21070 (ACN08Q_21010)	-	2798992..2799978 (+)	987	WP_008988493.1	ABC transporter permease	-
ACN08Q_RS21075 (ACN08Q_21015)	-	2799981..2801015 (+)	1035	WP_107184789.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127187.64 Da
• Isoelectric Point: 6.3006

>NTDB_id=1104907 ACN08Q_RS21060 WP_419243713.1 2793001..2796387(+) (chiS) [Photobacterium leiognathi subsp. mandapamensis strain Sr1.18]
MQNTTRFKRLQHTLMLAFIVLSITPLVLSALYFLNSHTKDLAEQSINHLASLRDNKQKQLYSFFAAKESEVKSFARSELS
NNSGGRFYGLVGAYHQLGDIEPQLAKQGRAHYFSQTLTKKNDNNNQTTYVGHERYRLMYKRYNAVYKEYLKRSDFKDIML
VDLSGNVVYSVHNHSLFGINLLKNQQVSPALKQTFETIKQKTKLSQKQPDQVPVTFTDFSQTANNSDTTAWFAAPIIQQG
YLHSYVFMELSNKAISELIQDLGNNANYVQTLLIGQDHKLRFSAESDLPKTLQSESISQALAGKSGVGSFKNYNHIPVLS
AFSPLDILGNKWALVVELPEKEAFARITELEKIFGFGMITAILLVIFVSHLLSNSITAPLLRLTWAAEKASGGDLDQIIE
GTERSDEIGRLAISFSRMQRSIREKIGLIKTQNDELEQSLKIIQQKNDELQTADKLKDEFLATTSHELRTPLHGMVGIAE
SLLAGANGPLQDPQRRQLEMLINSGQRLTNLVDDLLDYHKMRYGDLDIHRHAIDLSAAVRLVLELSSHLLGNKPVRIINQ
IPADLPLVDADEQRLEQVLYNLVGNAIKYTSEGKIIISATVLEQQLRVQVVDTGQGIPSEQLEHIFEPLIQANSGSANYR
QGAGLGLSISRQLIELMGGRLYVSSQPMVGTTFSFTLNLATEAQINAISHESTSQHFQAPSLDSSSCESSNLPENPNGDL
ILVVDDEPVNLQILNNFLRLAGYRVKTAENGPQALAMVEEQRPDLILLDIMMPEMSGYEVCTILRKQYSIFELPIMMLSA
LGQIQDRIKGFECGANDYLTKPFNKEELIARIQAYLQASKTEHEKQKNQNLQQEIHRREQVEISLIEAQSRLLGLLDSTT
EAIICVQNEGRIRYVNSAAGKLFKRPPEQLERHTISDILAAELPDTITDSHHYNGKLSFLIGEQVQTLSTDVINLPQESG
LKQMFVFDSQGPSADHRIGLLENAVDMLSEFAFNGDKNNLQQLRELGGEFTRLADKLDSNNQNKGQQIRELLVESMKNTL
MLWESESNKTKFELAEESGLWRVYLDRSTLQTRTLDKYLHLETLPKTPRWRTVINTMDYVLERCNQPTAARQELVTMRDK
LHHTISTS

Nucleotide

• Length: 3387 bp

>NTDB_id=1104907 ACN08Q_RS21060 WP_419243713.1 2793001..2796387(+) (chiS) [Photobacterium leiognathi subsp. mandapamensis strain Sr1.18]
ATGCAGAATACTACGCGATTTAAACGTCTCCAACATACGTTAATGTTGGCTTTTATTGTGCTCAGCATCACCCCTTTGGT
TTTATCAGCCTTATATTTTCTAAACTCACATACCAAAGATCTTGCAGAGCAAAGTATCAATCACTTAGCCTCTTTACGCG
ATAATAAGCAAAAGCAGCTCTACAGCTTTTTTGCCGCAAAAGAATCTGAGGTGAAGAGTTTCGCTCGCTCAGAATTATCC
AATAACAGTGGTGGTCGTTTTTATGGCCTCGTGGGTGCTTATCACCAACTCGGTGACATCGAGCCACAACTTGCAAAGCA
AGGGCGTGCTCACTATTTCTCACAAACCCTGACCAAGAAAAACGACAACAACAACCAAACCACCTATGTAGGGCATGAAC
GCTATCGTTTGATGTATAAGCGCTATAACGCAGTTTATAAAGAATATTTAAAACGTTCAGACTTCAAAGACATCATGTTA
GTTGATTTGTCAGGTAACGTGGTTTATTCCGTCCATAATCACAGCTTATTTGGCATTAATTTGCTTAAAAATCAGCAAGT
ATCACCTGCGCTAAAGCAAACCTTTGAAACCATTAAGCAAAAAACCAAATTAAGCCAGAAACAGCCCGATCAAGTACCTG
TTACTTTTACTGATTTCAGTCAAACTGCCAATAACAGTGATACAACGGCATGGTTTGCTGCTCCTATTATTCAGCAAGGC
TATTTGCACAGTTATGTGTTTATGGAGCTGAGTAACAAAGCAATTTCTGAGCTCATTCAAGATCTGGGTAACAATGCTAA
TTACGTCCAAACACTACTGATTGGCCAAGATCATAAACTGCGTTTTTCAGCAGAATCAGATTTACCAAAAACCTTACAAA
GTGAAAGTATTAGCCAAGCATTAGCAGGGAAATCTGGCGTGGGTAGCTTTAAAAACTACAATCACATCCCAGTACTCAGT
GCCTTTTCACCACTCGATATTCTGGGTAATAAATGGGCGTTAGTGGTTGAGTTACCAGAAAAAGAAGCCTTTGCACGCAT
TACTGAGTTAGAGAAAATCTTTGGCTTTGGCATGATCACCGCCATTCTCTTGGTAATTTTCGTCTCTCACCTACTTTCCA
ACTCTATTACGGCACCATTATTACGTTTAACTTGGGCTGCAGAGAAAGCCTCTGGTGGCGATCTTGATCAGATCATTGAA
GGTACTGAACGCAGCGATGAAATTGGTCGCTTAGCGATCAGTTTCTCACGTATGCAACGTTCTATCCGAGAGAAAATTGG
TCTAATCAAAACCCAAAATGATGAACTAGAACAAAGCCTTAAGATCATCCAACAGAAAAATGATGAGCTACAAACTGCAG
ATAAACTAAAAGATGAATTTCTTGCGACGACTTCCCATGAACTGCGTACACCGCTTCATGGCATGGTCGGTATTGCTGAA
TCCCTACTGGCAGGTGCTAATGGCCCACTACAAGATCCACAGCGTCGTCAGCTTGAAATGCTGATCAACAGTGGTCAACG
CTTAACGAACTTGGTTGATGATCTGCTGGATTATCACAAGATGCGCTATGGCGATCTTGATATTCATCGCCATGCTATTG
ATTTATCAGCAGCTGTACGTTTAGTTTTAGAACTTTCAAGCCATCTATTAGGCAATAAACCAGTACGTATTATTAACCAA
ATACCAGCTGATTTACCGCTGGTTGATGCCGATGAACAGCGTCTAGAGCAAGTGCTATACAACCTTGTTGGTAATGCGAT
TAAGTACACATCTGAAGGGAAAATTATTATCTCTGCCACTGTGCTTGAGCAGCAATTACGAGTACAAGTCGTCGATACAG
GCCAAGGTATTCCTAGTGAGCAGCTTGAACATATCTTTGAGCCATTGATCCAAGCAAATTCTGGCTCAGCTAATTATCGT
CAAGGGGCTGGGCTTGGGCTATCAATCAGCCGCCAACTAATTGAATTAATGGGTGGCCGTTTATACGTCAGCAGCCAGCC
AATGGTCGGTACAACCTTTAGCTTTACCTTGAATTTGGCGACAGAGGCACAAATTAACGCGATTTCTCACGAGTCCACCA
GCCAACATTTCCAAGCACCATCATTAGATTCAAGCAGTTGTGAAAGTAGTAACTTACCAGAAAACCCTAATGGTGACTTG
ATCCTAGTCGTTGATGACGAGCCTGTTAACCTACAGATCCTGAACAATTTTTTACGTTTAGCTGGCTATCGTGTGAAAAC
GGCAGAAAATGGTCCGCAAGCATTAGCAATGGTGGAAGAGCAACGTCCAGATCTGATTTTGCTCGACATTATGATGCCAG
AAATGAGTGGCTATGAAGTTTGTACAATCCTAAGAAAGCAATACTCTATTTTTGAGTTGCCAATTATGATGCTGTCAGCC
TTAGGACAGATCCAAGATCGCATTAAAGGCTTTGAGTGTGGCGCCAATGACTATTTAACCAAACCCTTTAATAAAGAAGA
GCTAATTGCTCGTATTCAAGCTTACCTACAAGCAAGTAAGACTGAACATGAAAAGCAAAAGAACCAAAACTTACAGCAAG
AGATCCATCGCCGAGAGCAAGTCGAAATCAGCTTAATTGAAGCGCAAAGCCGTTTACTGGGGTTACTAGACTCCACCACA
GAAGCTATCATTTGTGTACAAAATGAAGGTCGGATTCGTTACGTAAACAGCGCTGCAGGCAAGCTATTTAAACGTCCACC
AGAGCAGCTAGAGCGCCATACAATAAGTGATATTTTAGCTGCTGAATTACCTGACACCATCACTGATAGCCACCATTACA
ATGGGAAATTGAGCTTCCTGATCGGTGAGCAAGTGCAAACACTATCAACCGATGTCATTAATTTGCCGCAAGAATCTGGG
CTGAAACAGATGTTTGTATTCGACAGTCAAGGGCCATCGGCAGATCACCGTATTGGCTTATTAGAAAATGCAGTCGATAT
GTTGTCAGAATTTGCCTTTAACGGTGATAAGAACAACCTACAGCAGCTTCGTGAGCTGGGCGGTGAATTTACTCGACTTG
CAGATAAACTCGATAGCAATAACCAAAATAAAGGCCAACAAATTCGAGAGTTGCTGGTTGAATCGATGAAAAACACCCTA
ATGCTATGGGAAAGCGAATCGAACAAAACCAAGTTTGAATTAGCAGAAGAAAGTGGTTTATGGCGTGTTTATCTAGACCG
TAGTACGTTACAAACGCGTACCTTAGATAAATATCTTCATCTTGAAACATTGCCTAAAACACCACGTTGGCGCACTGTGA
TTAATACCATGGATTATGTACTTGAACGCTGTAATCAACCAACAGCGGCACGTCAAGAGCTCGTCACCATGCGTGATAAA
CTGCACCATACCATTAGTACCAGCTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (571-680)

• HAMP domain (HAMP) (371-424)

• His Kinase A (phospho-acceptor) domain (HisKA) (457-522)

• Response regulator receiver domain (Response_reg) (721-833)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	56.549	100	0.566