Detailed information NTG1104833

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: ACN08T_RS14585
• Genome accession: NZ_CP183248
• Coordinates: 3139062..3142448 (+)
• Length: 1128 a.a.
• NCBI ID: WP_419206086.1
• Uniprot ID: -
• Organism: Photobacterium leiognathi subsp. mandapamensis strain Sc9.10a
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 3134062..3147448

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN08T_RS14570 (ACN08T_14565)	-	3134837..3136174 (+)	1338	WP_305841264.1	IS4 family transposase	-
ACN08T_RS14575 (ACN08T_14570)	-	3136495..3137580 (+)	1086	WP_008988489.1	AI-2E family transporter	-
ACN08T_RS14580 (ACN08T_14575)	rsmC	3137739..3138761 (+)	1023	WP_419206084.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
ACN08T_RS14585 (ACN08T_14580)	chiS	3139062..3142448 (+)	3387	WP_419206086.1	response regulator	Regulator
ACN08T_RS14590 (ACN08T_14585)	-	3143227..3144903 (+)	1677	WP_107184790.1	ABC transporter substrate-binding protein	-
ACN08T_RS14595 (ACN08T_14590)	-	3145053..3146039 (+)	987	WP_008988493.1	ABC transporter permease	-
ACN08T_RS14600 (ACN08T_14595)	-	3146042..3147076 (+)	1035	WP_107184789.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127214.62 Da
• Isoelectric Point: 6.3006

>NTDB_id=1104833 ACN08T_RS14585 WP_419206086.1 3139062..3142448(+) (chiS) [Photobacterium leiognathi subsp. mandapamensis strain Sc9.10a]
MQNTTRFKRLQHTLMLAFIVLSITPLVLSALYFLNSHTKDLAEQSINHLASLRDNKQKQLYSFFAAKESEVKSFARSELS
NNSGGRFYGLVGAYHQLGDIEPQLAKQGRAHYFSQTLTKKNDNNNQTTYVGHERYRLMYKRYNAVYKEYLKRSDFKDIML
VDLSGNVVYSVHNHSLFGINLLKNQQASPALKQTFETIKQKTKLSQKQPDQVPVTFTDFSQTANNRDTTAWFAAPIIQQG
YLHSYVFMELSNKAISELIQDLGNNANYVQTLLIGQDHKLRFSAESDLPNTLQSESISQALAGKSGVGSFKNYNHIPVLS
AFSPLDILGNKWALVVELPEKEAFARITELEKIFGFGMITAILLVIFVSHLLSNSITAPLLRLTWAAEKASGGDLDQIIE
GTERSDEIGRLAISFSRMQRSIREKIGLIKTQNDELEQSLKIIQQKNDELQTADKLKDEFLATTSHELRTPLHGMVGIAE
SLLAGANGPLQDPQRRQLEMLINSGQRLTNLVDDLLDYHKMRYGDLDIHRHAIDLSAAVRLVLELSSHLLGNKPVRIINQ
IPADLPLVDADEQRLEQVLYNLVGNAIKYTSEGKIIISATVLEQQLRVQVVDTGQGIPSEQLEHIFEPLIQANSGSANYR
QGAGLGLSISRQLIELMGGRLYVSSQPMVGTTFSFTLNLATEAQINAISHESTSQHFQAPSLDSSSCESSNLPENPNGDL
ILVVDDEPVNLQILNNFLRLAGYRVKTAENGPQALAMVEEQRPDLILLDIMMPEMSGYEVCTILRKQYSIFELPIMMLSA
LGQIQDRIKGFECGANDYLTKPFNKEELIARIQAYLQASKTEHEKQKNQSLQQEIHRREQVEISLIEAQSRLLGLLDSTT
EAIICVQNEGRIRYVNSAAGKLFKRPPEQLERHTISDILAAELPDTITDSHHYNGKLNFLIGEQVQTLSTDVINLPQESG
LKQMFVFDSQGPSADHRIGLLENAVDMLSEFAFNGDKNNLQQLRELGGEFTRLADKLDSNNQNKGQQIRELLVESMKNTL
MLWESESNKTKFELAEESGLWRVYLDRSTLQTRTLDKYLHLETLPKTPRWRTVINTMDYVLERCNQPTAARQELVTMRDK
LHHTISTS

Nucleotide

• Length: 3387 bp

>NTDB_id=1104833 ACN08T_RS14585 WP_419206086.1 3139062..3142448(+) (chiS) [Photobacterium leiognathi subsp. mandapamensis strain Sc9.10a]
ATGCAGAATACTACGCGATTTAAACGTCTCCAACATACGTTAATGTTGGCTTTTATTGTGCTCAGCATCACCCCTTTGGT
TTTATCTGCCTTATATTTTCTAAACTCACATACCAAAGATCTTGCCGAGCAAAGTATCAATCACTTAGCCTCTTTACGCG
ATAATAAGCAAAAGCAGCTCTACAGCTTTTTTGCCGCAAAAGAATCAGAGGTGAAGAGTTTCGCTCGCTCAGAATTATCC
AATAACAGTGGCGGTCGTTTTTATGGCCTCGTGGGCGCTTATCACCAACTCGGTGACATCGAGCCACAGCTTGCAAAGCA
AGGGCGTGCTCACTATTTCTCACAAACCCTGACCAAGAAGAACGACAACAACAACCAAACCACCTATGTGGGGCATGAAC
GCTATCGTTTGATGTATAAGCGCTATAACGCAGTTTATAAAGAATATTTAAAACGTTCAGACTTCAAAGACATCATGTTG
GTTGATTTGTCAGGTAACGTGGTTTATTCCGTCCATAATCACAGCTTATTTGGCATTAATTTGCTTAAAAATCAGCAAGC
ATCACCTGCACTAAAGCAGACCTTTGAAACCATTAAACAAAAAACCAAATTAAGCCAAAAACAGCCTGATCAAGTACCTG
TTACTTTTACTGATTTCAGCCAAACAGCCAATAACCGTGATACAACGGCATGGTTTGCTGCCCCTATTATTCAGCAAGGC
TATTTGCACAGTTACGTGTTTATGGAGCTGAGTAACAAAGCAATTTCTGAGCTCATTCAAGATCTGGGTAACAATGCTAA
TTACGTCCAAACACTACTGATTGGCCAAGATCATAAACTGCGTTTTTCAGCAGAATCAGATTTACCCAATACCTTACAAA
GTGAAAGTATTAGCCAAGCATTAGCAGGGAAATCTGGCGTGGGTAGCTTTAAAAACTACAATCACATCCCAGTACTCAGT
GCCTTTTCACCACTCGATATTCTGGGTAATAAATGGGCGTTAGTGGTTGAGTTACCAGAAAAAGAAGCCTTTGCACGCAT
TACTGAGTTAGAGAAAATCTTTGGCTTTGGCATGATCACCGCCATTCTCTTGGTGATTTTCGTCTCTCACCTACTTTCCA
ACTCTATTACGGCACCATTATTACGTTTAACTTGGGCTGCAGAGAAAGCCTCTGGTGGCGATCTTGATCAGATCATTGAA
GGTACTGAACGCAGCGATGAAATTGGTCGCCTTGCAATAAGCTTTTCACGTATGCAACGTTCTATCCGAGAGAAAATTGG
TCTAATCAAAACCCAAAATGATGAACTAGAACAAAGCCTTAAGATCATCCAGCAGAAAAATGATGAGCTTCAAACTGCAG
ATAAACTAAAAGATGAATTTCTTGCAACGACTTCCCATGAACTGCGTACACCGCTTCATGGCATGGTAGGTATTGCTGAA
TCCTTACTGGCAGGTGCTAATGGCCCACTGCAAGATCCACAGCGTCGTCAGCTTGAAATGCTAATCAACAGTGGTCAACG
CTTAACAAACTTGGTTGACGATCTGCTAGATTATCACAAGATGCGCTATGGCGATCTTGATATTCATCGCCATGCTATTG
ATTTATCAGCAGCTGTACGTTTGGTTTTAGAACTTTCAAGCCATCTATTAGGCAATAAACCAGTACGTATTATTAACCAA
ATACCAGCTGATTTACCGCTGGTTGATGCCGATGAACAGCGTCTAGAGCAAGTGCTATACAACCTTGTTGGTAATGCGAT
TAAGTACACATCTGAAGGGAAAATTATTATCTCTGCCACTGTGCTTGAGCAGCAATTACGAGTACAAGTCGTCGATACCG
GCCAAGGTATTCCTAGTGAGCAGCTTGAGCATATCTTTGAGCCATTGATCCAAGCGAATTCTGGCTCGGCTAATTATCGT
CAAGGGGCTGGACTTGGGCTATCAATCAGCCGCCAACTGATTGAATTAATGGGCGGTCGTTTATACGTCAGCAGCCAGCC
AATGGTCGGTACAACCTTTAGCTTTACCTTGAATTTGGCGACAGAGGCACAAATTAACGCGATTTCTCACGAGTCCACCA
GCCAACATTTCCAAGCACCATCATTAGATTCAAGCAGTTGTGAAAGTAGTAACTTACCAGAAAACCCTAATGGTGACTTG
ATCCTAGTCGTTGATGACGAGCCTGTTAACCTACAGATCCTCAACAATTTTTTACGTTTAGCTGGCTATCGTGTGAAAAC
AGCAGAAAATGGTCCGCAAGCATTAGCAATGGTAGAAGAGCAACGTCCAGATCTGATTTTGCTCGACATTATGATGCCAG
AAATGAGTGGTTATGAAGTTTGTACAATCCTAAGAAAGCAATACTCTATTTTTGAGTTGCCAATCATGATGCTGTCAGCG
TTAGGACAGATCCAAGATCGCATTAAAGGCTTTGAGTGTGGCGCCAATGACTATTTAACCAAACCCTTTAATAAAGAAGA
GCTGATTGCTCGTATTCAAGCTTACCTTCAAGCAAGTAAGACTGAACATGAAAAGCAAAAGAACCAAAGCTTACAGCAAG
AGATCCATCGCCGGGAGCAAGTCGAAATCAGCTTAATTGAAGCGCAAAGCCGTTTACTGGGGCTACTAGACTCCACCACT
GAAGCGATCATTTGTGTACAAAATGAAGGTCGGATCCGTTATGTAAACAGCGCTGCAGGCAAGCTATTTAAACGTCCACC
AGAGCAGCTAGAGCGCCATACAATAAGTGATATTTTAGCTGCTGAATTACCTGACACCATCACTGATAGCCACCATTACA
ATGGGAAATTGAACTTCCTGATCGGTGAGCAAGTGCAAACACTATCAACTGATGTCATTAATTTGCCGCAAGAATCTGGG
CTGAAACAGATGTTTGTATTCGACAGTCAAGGGCCATCGGCAGATCACCGTATTGGCTTATTAGAAAATGCAGTCGATAT
GTTGTCAGAATTTGCCTTTAACGGTGATAAGAACAACCTACAGCAGCTTCGTGAGCTGGGCGGAGAATTTACTCGACTTG
CAGATAAACTCGATAGCAATAACCAAAATAAAGGCCAACAAATTCGAGAGTTGCTGGTTGAATCGATGAAAAACACCCTA
ATGCTATGGGAAAGCGAATCGAACAAAACCAAGTTTGAATTAGCAGAAGAAAGTGGTTTATGGCGTGTTTATCTAGACCG
TAGTACGTTACAAACGCGTACCTTAGATAAATATCTTCACCTTGAAACATTGCCTAAAACACCACGCTGGCGCACTGTGA
TTAATACCATGGATTATGTACTTGAACGCTGTAATCAACCAACAGCGGCACGCCAAGAGCTCGTCACCATGCGTGATAAA
CTGCACCATACCATTAGTACCAGCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (371-424)

• His Kinase A (phospho-acceptor) domain (HisKA) (457-522)

• Response regulator receiver domain (Response_reg) (721-833)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (571-680)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	56.549	100	0.566